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Detailed information on CNT30321313


BLAST search results

BLAST vs Swiss-Prot:
sp|P69309|UBIQP_AVEFA, E-value = 0.0

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30674319Asparagus officinalisSetaria viridis59.1277.7385.94775forward
CNT30519947Asparagus officinalisSetaria italica52.0278.2185.48682forward
CNT30641270Asparagus officinalisNymphaea colorata81.8553.7382.291073forward
CNT30528977Asparagus officinalisEucalyptus grandis65.8364.486.44863forward
CNT30546269Asparagus officinalisIpomoea triloba58.7385.7583.77770forward
CNT30513501Asparagus officinalisJuglans regia50.3481.2885.45660forward
CNT30500348Asparagus officinalisCoffea canephora63.3155.1583.98830forward
CNT30274489Asparagus officinalisChenopodium quinoa65.3770.0285.18857forward
CNT30379426Asparagus officinalisManihot esculenta65.8374.5383.2863forward
CNT30156153Asparagus officinalisPistacia vera66.1375.2683.16867forward
CNT30635990Asparagus officinalisCapsicum annuum82.352.0583.871079forward
CNT3094992Asparagus officinalisSolanum tuberosum66.3674.7484.83870forward
CNT30191758Asparagus officinalisSecale cereale82.370.8584.341079forward
CNT30538027Asparagus officinalisBrassica napus82.5357.0782.811082forward
CNT30238962Asparagus officinalisBrassica oleracea65.644.4983.49860forward
CNT30242826Asparagus officinalisAvena sativa64.9168.0887.07851forward
CNT30264722Asparagus officinalisBrassica rapa66.3682.2383.22870forward
CNT30445192Asparagus officinalisSaccharum spontaneum64.9161.6284.37851forward
CNT30217431Asparagus officinalisKalanchoe fedtschenkoi64.9162.8584.14851forward
CNT30338865Asparagus officinalisEragrostis tef81.8586.682.21073forward
CNT30359535Asparagus officinalisLactuca sativa65.1450.5683.49854forward
CNT30704854Asparagus officinalisPrunus avium82.360.5283.871079forward
CNT3024139Asparagus officinalisPopulus trichocarpa66.3681.0183.79870forward
CNT30593897Asparagus officinalisEragrostis curvula64.9175.7885.9851forward
CNT30334101Asparagus officinalisCynara cardunculus82.8448.9981.491086forward

Expression of CNT30321313

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MVSELSTSKVMVLPVRVLTKICMPPLSLSTKWRVDSFWML*

>peptide 2 (48 aa)
MEGRLLLDVVVSKGTAILQLLASKNQPLLVWGDALLVLNLGFYIVDGV*

>peptide 3 (70 aa)
MRADPFTSHHEDEAPGEVWTPSGCCSPRGYVHPPAACLQRSASVGPEGSPPCPGSSPSHCQSCRSSPPPG*

>peptide 4 (30 aa)
SFAKTNKTKPHDRKIIYHITRHYYQPVTKY*

>peptide 5 (35 aa)
KLCQNEQNKTTRSQDYLPHNKTLLPTGHKVLNIKT*

>peptide 6 (31 aa)
MVSELSTSKVMVLPVRVLTKICMPPLSLSTR*

Sequence

>CNT30321313
GAAGCTTTGCCAAAACGAACAAAACAAAACCACACGATCGCAAGATTATTTACCACATAACAAGACACTATTACCAACCGGTCACAAAGTACTAAACATA
AAAACATAAAGAAACTACATATTAAAGAGTTCAAGGACTGCCAGCCATCACACTTCGGCTGGCCATTATCCAACAGACACAAAGTTTTCAAACGAACAGT
AAACTAGCAGAGACACCCAAATGCGAGCCGACCCATTCACATCCCACCACGAAGACGAAGCACCAGGTGAAGTGTGGACTCCTTCTGGATGTTGTAGTCC
GCGAGGGTACGTCCATCCTCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGTTGGTCCGGAGGGATCCCCTCCTTGTCCTGGATCTTCGCCTTCACATTGT
CAATCGTGTCGGAGCTCTCCACCTCCAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACAAAAATCTGCATACCACCACGGAGACGGAGGACAAGGTGGAG
GGTGGACTCCTTCTGAATGTTATAATCCGCCAACGTTCGCCCATCCTCAAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCTGGGGGGATTCCCTCC
TTGTCCTGGATCTTTGCTTTCACATTGTCGATGGTGTCGGAGCTCTCCACTTCCAAAGTGATGGTCTTGCCGGTTAGGGTCTTAACAAAAATCTGCATGC
CTCCCCTCAGCCTCAGCACAAGGTGAAGGGTGGACTCCTTCTGGATGTTATAGTCAGCGAGGGTGCGGCCATCCTCAAGCTGCTTGCCGGCAAAAATCAA
CCTCTGCTGGTCTGGGGGGATTCCCTCCTTGTCCTGGATCTTTGCTTTCACATTGTCGATGGTGTCGGAGCTCTCCACTTCCAAAGTGATGGTCTTGCCG
GTTAGGGTCTTGACAAAAATCTGCATGCCTCCCCTCAGCCTGAGCACCAAATGGAGGGTCGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTACGGCCAT
CCTCCAACTGCTTGCCAGCAAAAATCAGCCTCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGAATCTTGGCTTTTACATTGTCGATGGTGTCTGAGCT
CTCCACTTCAAGGTGAGGGTCTTGACGAAAATCTGCATCCCACCACGAAGACGGAGGACGAGGTGGAGTGTGGACTCCTTTTGGATATTGTAATCAGCGA
GGGTACGGCCGTCCTCAAGCTGTTTGCCGGCAAAGATCAGTCTTTGCTGGTCAGGGGGGATCCCCTCCTTGTCCTGGATTTTGGCTTTGACATTATCAAT
GGTGTCAGAAC