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Detailed information on CNT30321088


BLAST search results

BLAST vs Swiss-Prot:
sp|A9L9E2|TI214_LEMMI, E-value = 2e-118

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30272010Asparagus officinalisChenopodium quinoa25.9339.3283.95243forward
CNT30730320Asparagus officinalisCorchorus capsularis28.828.3581.85270forward
CNT30237505Asparagus officinalisBrassica oleracea30.9513.8183.1290forward
CNT3062643Asparagus officinalisArabidopsis lyrata26.255.4582.93246forward
CNT30262672Asparagus officinalisBrassica rapa30.954.0583.1290forward
CNT30620564Asparagus officinalisCajanus cajan32.125.8282.39301forward

Expression of CNT30321088

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MGFIFSSSFIIKFITRTILMTHLVFFFETF*

>peptide 2 (38 aa)
MGSKKEGRFRGDPKGSSASFPQIVKKQKLSFFSFFFIF*

>peptide 3 (32 aa)
PNYFFFIFCDSFCLSPNCDCFISKIFDFRFYE*

Sequence

>CNT30321088
TTCCTAACTATTTTTTTTTTATCTTTTGTGATTCCTTCTGTTTGAGTCCTAATTGTGATTGTTTTATTAGCAAGATCTTTGATTTTCGTTTCTATGAGTG
AAGAATTTTCATTTACACAATTCATGGATCGAATTTGAGTGGTCGATTCACGGATAATCTTATTATTTATATTGGAATCTTTTCCGCTTTCATTCGGTTC
ATATACTTTGATCTCCCTCAATTTCAATAAGAAAATGGGGTTTATTTTTTCAAGTTCTTTCATTATTAAGTTTATAACTAGAACTATTTTGATGACCCAT
CTTGTTTTTTTTTTTGAAACTTTTTGAAACCGTTTTCTTCTTTCTTTGAAAACCTTTATAACTTGAAAAAATTGCTTTTTCAATTTTCTCATTTTTTTTT
CGAGTTCTTTAAAAATGGGTTCAAAAAAAGAAGGTCGTTTTCGGGGAGACCCAAAAGGTAGTTCTGCTTCCTTTCCCCAGATTGTTAAAAAACAAAAATT
GTCTTTTTTCTCCTTTTTCTTTATTTTCTGATCTCGATGATGAGATCGTATTTTAGATCTTCTCCAAGGTTTCAGACAGAAGGGAAATAAAATCTTTATT
TGAATACCGTCTGTTAACCAATTTTGGGGAAATTCTGTTTCTGATAATTGAACGCCATTATAGGTACATTTAACATGCATTTCTTTATTCCATTCCTTCA
AATCCTCATACCACTCGGGGAATTGCAATAATAACATACGGCCGATATTTTTAGCTATTATCAATAAGGGTAATATAACGTATTTTCGAAGAAAAGATTG
GGTTACTAACATTAAACCTCTTATTGCTTGAGTAAATATAAAGATATCCCAAGCTTCTGATATTGTTATTCTTTCATTTTCCTCTTCTTTTTCTTCGTTT
GTTTTCTCCTTTTCTTTTGTCTCCTCCTAAAAATAAG