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Detailed information on CNT30320583


BLAST search results

BLAST vs Swiss-Prot:
sp|O22993|FTSI1_ARATH, E-value = 6e-13

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30671345Asparagus officinalisSetaria viridis24.3424.61100267reverse complement
CNT30641383Asparagus officinalisNymphaea colorata24.348.5597267forward
CNT30702366Asparagus officinalisQuercus lobata24.3426.8198.5267reverse complement
CNT30504586Asparagus officinalisNicotiana attenuata24.3415.1698.88267forward
CNT3094274Asparagus officinalisSolanum tuberosum16.0459.6698.3176reverse complement
CNT30306129Asparagus officinalisTriticum aestivum24.3421.4599.63267forward
CNT30221833Asparagus officinalisHordeum vulgare24.3419.5698.88267forward
CNT30384972Asparagus officinalisTriticum turgidum24.3443.13100267reverse complement
CNT30543270Asparagus officinalisBrassica napus24.3411.1598.88267forward
CNT30508923Asparagus officinalisSolanum lycopersicum24.3479.9498.88267forward
CNT30554477Asparagus officinalisOryza glaberrima24.1636.6598.11265reverse complement
CNT30147396Asparagus officinalisMedicago truncatula24.348.9798.5267forward
CNT30441199Asparagus officinalisAegilops tauschii24.3426.89100267forward
CNT30258490Asparagus officinalisAvena sativa17.2326.1898.94189forward
CNT30660235Asparagus officinalisTriticum dicoccoides24.3428.37100267reverse complement
CNT30605073Asparagus officinalisGossypium raimondii24.3417.5798.88267reverse complement
CNT3067934Asparagus officinalisLeersia perrieri4.6522.3790.251reverse complement
CNT30202530Asparagus officinalisHelianthus annuus24.3436.4398.5267forward
CNT30718256Asparagus officinalisMalus domestica golden20.9775.1689.13230forward
CNT30682011Asparagus officinalisTriticum urartu24.3427.38100267forward
CNT30429739Asparagus officinalisPapaver somniferum24.348.398.5267forward
CNT30571801Asparagus officinalisVitis vinifera24.3420.4698.88267reverse complement
CNT3056076Asparagus officinalisAmborella trichopoda24.3411.693.63267forward
CNT30118993Asparagus officinalisCitrus clementina23.1572.1693.7254forward
CNT3038324Asparagus officinalisCucumis melo24.3414.1698.13267reverse complement
CNT30331625Asparagus officinalisDioscorea rotundata8.328.6210091forward
CNT3099471Asparagus officinalisOryza rufipogon14.1361.51100155reverse complement
CNT30557400Asparagus officinalisPanicum hallii24.0719.2497.73264forward

Expression of CNT30320583

Peptides detected in this lncRNA

>peptide 1 (49 aa)
MRSLSPRHFEAKVAEETLKNVVPHSVATALARSVFPVPGGPNIRTPFQGR

Sequence

>CNT30320583
GATACGCCGGGGATAACAGGCTGATGACTCCCAAGAGCTTTTATTGACGGAGTCGTTTGGCACCTCGATGTCGACTCATCACATCCTGGGGTTGAAGAAG
GTCCCAAGGGTTCGGTTGTTCGCCGATGAAAGTGGTACGTGAGTTGGGTTTAGAACGTCGTGAGACAGTTCGGTTCCTATCTACCGTTGGTTAGGCTCAA
GCGTTGATTCTGCTCGTGAGCGTAATGGTATAAGCCTGCCTGACTGTGAGACCGACTGGTCGAACAGAGACGAAAGTCGGCCATAGTGATCCGGGAGTCC
CGTGTGGAAGGGCTCTCGCTCAACGGATCAAAGGTACGCCGGGGATAACAGGCTGATGACTCCCAAGAGCTCTTATCGACGGAGTCGTTTGGCACCTCGA
TGTCGACTCATCACATCCTGGGGTTGAAGAAGGTCCCAAGGGTTCGGTTGTTCGCCGAGTGATCGCGCTGTTAAGCCCTAGCAGCTTTCTTCCTTGCCTT
TCCCGCGGGATGTACAATCCAAAAACTGGAATGTCTGAACTCAGAAGAACAAATCTCCATAGCACGTGTCCGCACTAAATGAGTTGTATGTTTCTCATTG
TCCTGCTCTCTATTGTGAAGTAACGCTATGGGATCATTCACAAACTAACAAACTCTACCTGTCTGTCAAAGCTTATTACTGACCTGCAGCAAATTTTTGC
TTCGTATATATATTGCCTAGGCCCTAGTTTATGCATTAATTGCAAAATTTCATGTGTACTTCATAAATAAAATAGAAAACAACATGCATTCGTAATAGAA
CAATCAGACACAAGGAAACAAAACAGGGAGAAAAACATGTGTTTCAAGTATATATATACCCTCGAGCATTGCAGAGAGAATCAATCTCATCAATGAATAT
GGTACTTGGAGCATAAGCTCTTGCAAGATCAAACAGACACCGAACCATGCGTTCACTCTCCCCACGCCATTTTGAAGCCAAAGTAGCTGAAGAAACATTG
AAGAATGTTGTTCCGCATTCAGTAGCTACAGCCTTAGCCAGGAGCGTCTTTCCAGTACCAGGTGGACCAAACATAAGAACACCTTTCCAAGGACGAC