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Detailed information on CNT30319856


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30522345Asparagus officinalisSetaria italica80.363084.89225forward
CNT30530404Asparagus officinalisEucalyptus grandis79.2962.5485.59222forward
CNT30316147Asparagus officinalisCorylus avellana73.5727.6583.01206forward
CNT30703138Asparagus officinalisQuercus lobata73.9339.583.09207forward
CNT3021247Asparagus officinalisCitrullus lanatus37.8611.5183.96106forward
CNT30729539Asparagus officinalisCorchorus capsularis96.0740.0379.18269forward
CNT3068683Asparagus officinalisQuercus suber73.9342.0783.57207forward
CNT30486152Asparagus officinalisOlea europaea44.6413.8182.4125forward
CNT30182233Asparagus officinalisSecale cereale73.9333.2887.44207forward
CNT30289293Asparagus officinalisTriticum aestivum42.1438.8288.98118forward
CNT30590847Asparagus officinalisMusa acuminata99.6461.0585.3279forward
CNT3084565Asparagus officinalisVigna radiata54.298.9980.26152forward
CNT30539234Asparagus officinalisBrassica napus8526.0181.51238forward
CNT30145616Asparagus officinalisMedicago truncatula26.4316.389.1974forward
CNT30261302Asparagus officinalisBrassica rapa91.0749.3281.18255forward
CNT30231964Asparagus officinalisAnanas comosus28.576.5686.2580forward
CNT30653881Asparagus officinalisRosa chinensis27.867.388.4678forward
CNT30343308Asparagus officinalisEragrostis tef60.7162.0485.88170forward
CNT30363710Asparagus officinalisSorghum bicolor63.2130.1581.92177forward
CNT30570592Asparagus officinalisVitis vinifera42.8637.1585120forward
CNT30645151Asparagus officinalisCannabis sativa63.9318.7883.24179forward
CNT3055709Asparagus officinalisAmborella trichopoda74.6431.9684.69209forward
CNT30105598Asparagus officinalisOryza longistaminata80.3632.6684225forward
CNT30574680Asparagus officinalisOryza barthii95.3629.1582.77267forward
CNT30499107Asparagus officinalisDigitaria exilis80.3657.5483.56225forward
CNT30115589Asparagus officinalisOryza nivara95.3618.7182.77267forward
CNT30603529Asparagus officinalisOryza punctata94.2934.5183.33264forward
CNT30174824Asparagus officinalisVigna angularis39.2911.5888.18110forward
CNT30550386Asparagus officinalisOryza brachyantha94.299684.09264forward
CNT3064271Asparagus officinalisSelaginella moellendorffii92.8647.2780260forward

Expression of CNT30319856

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MGSTTSCRISSNLGFPRWCATFCFLPVKKL

Sequence

>CNT30319856
GTGCTCAAGTGGGTCTCCATAGACTTCACTGGTACTTGTTATTAGAAATCTAGCTCCAACCCTCTTGGCCAATCCCAACATGTTCAATGTCCCCATCACA
TTTGATATGATGGTCTTGATGGGATTGAACTTGTAGTGCACCGGCGACGCGGGGCACGCGAGGTGGTAAATCTGATCCACCTCCAACAAGATGGGCTCCA
CCACGTCGTGCCGGATCAGCTCGAACCTCGGGTTCCCCAGGTGGTGCGCCACGTTCTGCTTCCTCCCCGTGAAAAAGTTG