Detailed information on CNT30319789


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30697161Asparagus officinalisOryza sativa62.9864.2282.44131reverse complement
CNT30550296Asparagus officinalisIpomoea triloba30.2919.2787.363reverse complement
CNT3084606Asparagus officinalisVigna radiata51.929.9285.19108reverse complement
CNT30554197Asparagus officinalisOryza glaberrima62.9827.4184.73131reverse complement
CNT30143656Asparagus officinalisMedicago truncatula62.9811.8381.68131forward
CNT30349956Asparagus officinalisEragrostis tef24.5219.6990.251reverse complement
CNT30596024Asparagus officinalisOryza meridionalis62.9848.783.21131forward
CNT30370879Asparagus officinalisOryza glumipatula62.9856.7183.21131forward
CNT30100349Asparagus officinalisOryza rufipogon62.9858.2283.97131forward
CNT30578099Asparagus officinalisOryza barthii62.9823.5683.21131forward
CNT30116624Asparagus officinalisOryza nivara62.9812.6683.21131forward

Expression of CNT30319789

Peptides detected in this lncRNA

>peptide 1 (68 aa)
LNPGVGTLLNLMDWPHKPPHVFSARFVLTHALPGKLPRGVTHPRISPGQARLTLEFLRVGFPKRRCILV

>peptide 2 (43 aa)
PESRSRYAIKSDGLASQTTTCLFSTFCPHSRAPWKTSQGGHPS*

>peptide 3 (32 aa)
MSFQHVLSSLTRSLENFPGGSPILEFLQAKHA*

Sequence

>CNT30319789
CCTGAATCCCGGAGTCGGTACGCTATTAAATCTGATGGACTGGCCTCACAAACCACCACATGTCTTTTCAGCACGTTTTGTCCTCACTCACGCGCTCCCT
GGAAAACTTCCCAGGGGGGTCACCCATCCTAGAATTTCTCCAGGCCAAGCACGCTTAACTTTGGAGTTTCTAAGAGTTGGGTTCCCGAAAAGAAGATGCA
TCTTGGTG