Detailed information on CNT30319312


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9M8S0|MBS1_ARATH, E-value = 4e-31

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30598181Asparagus officinalisFraxinus excelsior8.3137.3382.57109reverse complement
CNT30687535Asparagus officinalisTriticum urartu8.2434.3987.96108reverse complement

Expression of CNT30319312

Peptides detected in this lncRNA

>peptide 1 (56 aa)
PRRREGPDCRSNRPSQGRPREAGVPSLQGHGSRCEIDADPSRGSPSKDPLRRVQDQ*

>peptide 2 (79 aa)
RGGGKGRIADRTGQVKGGHAKLECPLCKVTAPDVKSMQIHHEARHPKIPFDESKINNLHASCAPDPAKPKPGVRGSIKN*

>peptide 3 (33 aa)
AAAGRAGLPIEPAKSRAATRSWSALSARSRLPM*

>peptide 4 (52 aa)
MCFDYSDMECKLHWRLICRGRRLTITSNAMASCYRIFFFFLVVMGGPLKRQN*

>peptide 5 (29 aa)
MKTRFLPSAENCTDCTNVSAEGIKSLRGD*

Sequence

>CNT30319312
CCGCGGCGGCGGGAAGGGCCGGATTGCCGATCGAACCGGCCAAGTCAAGGGCGGCCACGCGAAGCTGGAGTGCCCTCTCTGCAAGGTCACGGCTCCCGAT
GTGAAATCGATGCAGATCCATCACGAGGCTCGCCATCCAAAGATCCCCTTCGACGAGTCCAAGATCAATAACCTCCACGCTTCTTGCGCCCCTGATCCCG
CTAAGCCTAAGCCCGGGGTCCGAGGCAGCATCAAGAACTGAAGGAATTGGAGCGACTGAGAGGAGAATTTGAAATATATTATACCAGTCATCTCTTTCTC
AATGCAAATGTTAATAGTACATATGTGGTTTACTCAAAGACAGGCTTGCTCATATGTTATATAGGTCTGCTATTTCAGATAGTTCGCTGTGAGACTTGTA
GCTTTGTAGGCGATATGGTTTAGTATTTCTATCTTTATTTTTACGATTCTCGTTTTCAGCATGAATTTGGTCTATCATTGGCAACATGCATTGATTTGGA
TTGGACCGGACATACTGGGTGACTCTTGAACTCTTTTGAGCATATATTTGAGTGGTGCCCTTTTGCAGCTTATATTGGCAAAAGATGAGATTCAAGGGAA
TGATTTAGTAAGATTTGATCATAAAAAGTGTGTATTGTGGAAAATGTTTTGATCAAGATATGTGCATGTGCACACTTTGTGAAATCTATACGTGTATGCA
AATTGATACTCAATAGAGATCTTGAAGCATTTCTCTTTGTTGTACATGCTGGTTGATAGCAGACAGGTCTGAGATCCCATGAGCCAAGCTTGCAGTTATG
AAGACAAGGTTTCTACCGTCTGCTGAAAATTGTACAGATTGCACGAACGTATCGGCAGAAGGCATCAAGTCTCTTCGAGGAGACTGATGTGTATGAAAAT
AGAATACGCCCTTCAGCCTATTTATTGAGTACTACGGATTTGCATGTGTTTTGACTACAGTGACATGGAATGTAAACTTCATTGGCGTTTAATTTGTAGA
GGAAGAAGACTTACTATTACTTCTAATGCCATGGCAAGCTGTTATCGGATTTTTTTTTTTTTTTTGGTGGTGATGGGGGGCCCTTTAAAGCGGCAGAATT
GAAGATGGGCAATGCGAACTCTTGTAATATTTTTCAGTTTCACATAAAGTCCTTCTCTCTTGTAATATTATGATAGACTAGTTGAGATGCACATGGTTGA
ATATCTTGATTATTTAAATTGATAAAAATAGAATAAAAAGAAAATAAAGTTTTTTTGCGGGATTGATCAACTCAATAATCTATCTTTCAAATAAAACATT
GTCATTTTTTC