Detailed information on CNT3031918


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9FXI9|GUN2_ARATH, E-value = 5e-08

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30639249Theobroma cacaoNymphaea colorata26.894.6387.3271forward
CNT30316599Theobroma cacaoCorylus avellana47.3544.0188125forward
CNT30381644Theobroma cacaoManihot esculenta47.3524.0488125forward
CNT30613838Theobroma cacaoArabis alpina33.712585.3989forward
CNT30609427Theobroma cacaoGossypium raimondii47.3519.8191.2125forward
CNT30362142Theobroma cacaoSorghum bicolor29.1713.1687.0177forward
CNT30151985Theobroma cacaoPrunus persica20.8315.6789.0955forward
CNT3022907Theobroma cacaoPopulus trichocarpa31.4420.890.3683forward

Expression of CNT3031918

Peptides detected in this lncRNA

>peptide 1 (38 aa)
SCFKEYNIDIIHIHCIPRNPKRLHIPTISSECWADSAT*

>peptide 2 (42 aa)
RVSKNTILISYIYTVYHEIQRDFIFQLSVLNAGPILQPDNQT*

>peptide 3 (32 aa)
MKSIMLVRSSNHGSNKCIRVWLCGISPFPSPFT

Sequence

>CNT3031918
CTCGTGTTTCAAAGAATACAATATTGATATCATACATATACACTGTATACCACGAAATCCAAAGAGACTTCATATTCCAACTATCAGTTCTGAATGCTGG
GCCGATTCTGCAACCTGACAACCAAACATAAGTTCTGCCTGTAGTTGTAGTTGGTGCGAACGTCATGAAATCCATCATGCTTGTCAGGTCCAGCAACCAT
GGCTCCAACAAGTGTATTAGGGTTTGGCTTTGTGGTATCTCTCCATTTCCATCCCCCTTTACAG