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Detailed information on CNT30319154


BLAST search results

BLAST vs Swiss-Prot:
sp|P13951|RBS_SINAL, E-value = 8e-37

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30535656Asparagus officinalisEucalyptus grandis28.4938.484.38192forward
CNT30514732Asparagus officinalisJuglans regia40.9531.1579.35276forward
CNT30372132Asparagus officinalisArabidopsis thaliana24.3325.3982.32164forward
CNT30727208Asparagus officinalisCorchorus capsularis40.6531.1481.39274forward
CNT30591347Asparagus officinalisMusa acuminata25.2226.1983.53170forward
CNT30657925Asparagus officinalisTriticum dicoccoides10.5321.0792.9671forward
CNT30310235Asparagus officinalisCamelina sativa2721.3683.52182forward
CNT3074948Asparagus officinalisBrassica juncea26.1125.3281.82176forward

Expression of CNT30319154

Peptides detected in this lncRNA

>peptide 1 (45 aa)
MPWGTRPCSCRAPSRPGWRRCTRTWGASTLSSICRRSTLGRRGGL*

>peptide 2 (87 aa)
MIKRKLVGSRLPDHLLRGLVGDEADALHLTVVVESDDPDECRGVLGLAVVELLHDLDGVGAPEHGELPHCPVSAVVVPWGGVGACRR*

>peptide 3 (40 aa)
MIRMNAVGYSALQLSSSFTTWMASVHPNMGSFHIVQYLPS*

Sequence

>CNT30319154
GCAAACACTTGATCCGTGCAAACAAAAAATAACGACATCCATCATAGCCAACATAATTCATTCATATACCATGTAGCCGGACCTATAACTTACTCATCAC
CAACATACATATCATCAATACAACTCTCATCCGTTGGAGAGAGAGCGGCTATATAAATACTTATATATATATACCAACATGCAACAATCTAAAAAAACCA
GTGGCAAAGAAATATTGGAAATTGAAAAGGAAAGCACTTCCAAATGATCAAGCGGAAACTAGTCGGAAGTCGACTTCCGGATCATTTACTGAGGGGGCTT
GTAGGCGATGAAGCTGACGCACTGCACTTGACGGTTGTTGTCGAATCCGATGATCCGGATGAATGCCGTGGGGTACTCGGCCTTGCAGTTGTCGAGCTCC
TTCACGACCTGGATGGCGTCGGTGCACCCGAACATGGGGAGCTTCCACATTGTCCAGTATCTGCCGTCGTAGTACCCTGGGGAGGCGTGGGGGCTTGTAG
GCGATGAAGCTGACGCACTGCACTTGACGGTTGTTGTCGAATCCGATGATCCGGATGAATGCCGTGGGGTACTCAATCTGCTTGATCAACTGCTCAATGG
ACAGGGTAGGAAGGTAGGAGAGGGTCTCGAACTTCTTGATGCCCTCAACAGGCCACACCTGCGACGTCGCACAA