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Detailed information on CNT30319113


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30703316Asparagus officinalisQuercus lobata10.3127.0492.7783reverse complement
CNT30373911Asparagus officinalisArabidopsis thaliana8.3222.4188.0667forward
CNT30272829Asparagus officinalisChenopodium quinoa9.3224.438875reverse complement
CNT30728687Asparagus officinalisCorchorus capsularis9.1924.4293.2474reverse complement
CNT3070208Asparagus officinalisQuercus suber8.225.8889.3966forward
CNT30526756Asparagus officinalisPhaseolus vulgaris9.8125.9987.3479reverse complement
CNT30708521Asparagus officinalisGlycine max9.5725.3387.0177reverse complement
CNT30190201Asparagus officinalisSecale cereale9.3224.9289.3375forward
CNT30566738Asparagus officinalisActinidia chinensis9.1920.6194.5974reverse complement
CNT30587665Asparagus officinalisMusa acuminata9.4424.5293.4276reverse complement
CNT3087060Asparagus officinalisVigna radiata9.8126.1687.3479reverse complement
CNT30538642Asparagus officinalisBrassica napus7.8326.8190.4863reverse complement
CNT30235726Asparagus officinalisBrassica oleracea7.9520.9289.0664reverse complement
CNT30669121Asparagus officinalisTriticum dicoccoides9.3224.6789.3375reverse complement
CNT30261746Asparagus officinalisBrassica rapa7.8326.8190.4863reverse complement
CNT30648233Asparagus officinalisRosa chinensis9.4424.7688.1676reverse complement
CNT30717425Asparagus officinalisMalus domestica golden9.4424.8493.4276reverse complement
CNT30154558Asparagus officinalisPrunus persica9.9426.1487.580reverse complement
CNT30408305Asparagus officinalisPapaver somniferum8.8224.5791.5571forward
CNT30120361Asparagus officinalisCitrus clementina7.8320.7988.8963forward
CNT30150129Asparagus officinalisBrachypodium distachyon9.3224.5189.3375reverse complement
CNT30176739Asparagus officinalisVigna angularis9.9425.8987.580reverse complement
CNT30724433Asparagus officinalisLupinus angustifolius9.3224.678875reverse complement

Expression of CNT30319113

Peptides detected in this lncRNA

>peptide 1 (83 aa)
MHSTAARDPSTVESGRFSLLCEASLTRCPPLQETSLRSAHTHHCPTWNGRASREYCTTRSSYKAQRSRPLNAPLGYKPTLLSSA

>peptide 2 (34 aa)
MYISWTIFSKKWQKRWVRWWTVTGPIADAQHSSP*

>peptide 3 (34 aa)
MYISWTIFSKKWQKRWVRWWTVTGPIADAQHSSP*

>peptide 4 (39 aa)
MHSTAARDPSTVESGRFSLLCEASLTRCPPLQETFIRNL*

>peptide 5 (41 aa)
MAKEVGSLVDCNRAYRGCTAQQPVILPPLRAGGFRCSVKPA*

>peptide 6 (41 aa)
MAKEVGSLVDCNRAYRGCTAQQPVILPPLRAGGFRCSVKPA*

Sequence

>CNT30319113
AGCCCAATTAAAACCTTTATTAGAAAGATAAATTACATGTCTCAATCATTTGCATCATGAACTGAGAGGAGCCACGAGGTATTAAATAAGTTTAGAAGAG
TAGGTATAAATAAAGTGGGTCATCTGTAGTTTACTTTATATGTACATCTCATGGACAATTTTCAGTAAAAAATGGCAAAAGAGGTGGGTTCGTTGGTGGA
CTGTAACCGGGCCTATCGCGGATGCACAGCACAGCAGCCCGTGATCCTTCCACCGTTGAGAGCGGGAGGTTTTCGCTGCTCTGTGAAGCCAGCCTGACGC
GGTGCCCTCCTCTTCAAGAAACCTTTATTAGAAACCTTTAAATATAGGATATTTAAGCCCAATTAAAACCTTTATTAGAAAGATAAATTACATGTCTCAA
TCATTTGCATCATGAACTGAGAGGAGCCACGAGGTATTAAATAAAGTGGGTCATCTGCAGTTTACTTTATATGTACATCTCATGGACAATTTTCAGTAAA
AAATGGCAAAAGAGGTGGGTTCGTTGGTGGACTGTAACCGGGCCTATCGCGGATGCACAGCACAGCAGCCCGTGATCCTTCCACCGTTGAGAGCGGGAGG
TTTTCGCTGCTCTGTGAAGCCAGCCTGACGCGGTGCCCTCCTCTTCAAGAAACGAGCCTTCGCTCGGCCCACACGCATCACTGCCCAACTTGGAACGGGC
GGGCCAGCAGAGAGTACTGCACAACCAGGTCCAGTTACAAGGCCCAACGTTCACGACCACTTAATGCCCCGCTTGGTTACAAGCCCACGCTACTGAGCTC
GGCGA