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Detailed information on CNT30319059


BLAST search results

BLAST vs Swiss-Prot:
sp|Q1KXP9|YCF15_HELAN, E-value = 9e-14

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30690834Asparagus officinalisOryza sativa43.0539.0690.29350reverse complement
CNT30677945Asparagus officinalisSetaria viridis43.0523.189.71350forward
CNT3021516Asparagus officinalisCitrullus lanatus75.1533.2289.69611forward
CNT30730658Asparagus officinalisCorchorus capsularis56.8358.8590.26462forward
CNT30198947Asparagus officinalisPisum sativum27.0626.4187.27220forward
CNT30492881Asparagus officinalisOlea europaea38.1348.0688.06310forward
CNT30502643Asparagus officinalisNicotiana attenuata58.0636.4584.75472forward
CNT30163195Asparagus officinalisPistacia vera24.7286.2783.08201reverse complement
CNT30191576Asparagus officinalisSecale cereale42.9389.0389.97349reverse complement
CNT30297822Asparagus officinalisTriticum aestivum43.0584.9590350reverse complement
CNT30543269Asparagus officinalisBrassica napus38.1310.4789.68310forward
CNT3082974Asparagus officinalisBrassica juncea38.1336.4789.35310reverse complement
CNT3017923Asparagus officinalisZea mays32.193.2187.74261forward
CNT30610477Asparagus officinalisGossypium raimondii40.8448.9791.57332forward
CNT30232463Asparagus officinalisAnanas comosus14.2749.1597.41116reverse complement
CNT30684722Asparagus officinalisTriticum urartu43.0532.890350forward
CNT30356763Asparagus officinalisLactuca sativa48.3472.5188.55393reverse complement
CNT30644293Asparagus officinalisCannabis sativa9.4723.9992.2177forward
CNT3056176Asparagus officinalisAmborella trichopoda34.696.0785.46282forward
CNT30150789Asparagus officinalisBrachypodium distachyon27.0626.6391.36220forward
CNT30101183Asparagus officinalisOryza rufipogon17.3423.986.52141forward
CNT30578031Asparagus officinalisOryza barthii23.3736.0588.95190reverse complement
CNT30550344Asparagus officinalisOryza brachyantha23.6281.791.67192reverse complement
CNT30111895Asparagus officinalisFicus carica8.8620.2290.2872reverse complement

Expression of CNT30319059

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MRLCTLQIGIHFLKDPGFRALVSRPRSFR*

>peptide 2 (64 aa)
MHSSNRNPFSERSWLSCFGESSEILSMTYVVLKGYLYDPIDCVRPAVATEWGKVYRKDSSFLLY*

>peptide 3 (68 aa)
ERSFLGLNLFIWNLGSSIFYFFFVLFFISFRFSFPLFSFYSLPSFLKSNRFVDPVEFDPFSHRARGTK*

>peptide 4 (46 aa)
RKILFGFEFVHLESGLFYFLLFFCFILYFISIFFPSLFFLFPSIIP*

>peptide 5 (56 aa)
MGESIQKRQFFSIILVLVSDPGSVSPFFHDELLALVLHFVSVDRGERGLSGKRVVP*

Sequence

>CNT30319059
CAGAAAGATCCTTTTTGGGTTTGAATTTGTTCATTTGGAATCTGGGCTCTTCTATTTTCTACTTTTTTTTTGTTTTATTCTTTATTTCATTTCGATTTTC
TTTCCCTCTCTTTTCTTTTTATTCCCTTCCATCATTCCTTAAGTCCAATAGGTTTGTTGATCCTGTAGAATTTGACCCATTTTCTCATCGAGCGAGGGGT
ACGAAATAAATCAGATTGATTTTTCGATCAAAATATGTAAAATCTTCAGTTTTTTCTTCTTCCTCTATCCATATCCCATAGGTAGAGCGTTTGAATCAAT
AGAGAACCTTTTCTTCTGTATGAATCGATATTATTACATTCTAATTCCTTCCCACTACCTCCTAAGGAAAAAACCAAATTGGATCCAAAATTGACGGGTT
AGTGTGAGCTTATCCATGCGGTTATGCACTCTTCAAATAGGAATCCATTTTCTGAAAGATCCTGGCTTTCGTGCTTTGGTGAGTCGTCCGAGATCCTTTC
GATGACCTATGTTGTGTTGAAGGGATATCTATATGATCCGATCGATTGCGTAAGGCCCGCGGTAGCAACGGAATGGGGGAAAGTATACAGAAAAGACAGT
TCTTTTCTATTATATTAGTATTAGTTAGTGATCCCGGCTCGGTGAGTCCCTTCTTCCATGATGAACTGTTGGCACTAGTCCTACATTTTGTCTCTGTGGA
CCGAGGAGAAAGGGGGCTCAGCGGGAAGAGGGTTGTACCATGAGAGAAGCAAGGGGTCAACTGCTTCAAATATACAACATGGATTCTGGCAATGCAATGT
AGTTGGACCCTCA