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Detailed information on CNT30318962


BLAST search results

BLAST vs Swiss-Prot:
sp|Q6ENB7|YCF68_ORYNI, E-value = 9e-36

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30673865Asparagus officinalisSetaria viridis39.1443.5792.52816forward
CNT30615873Asparagus officinalisSesamum indicum8.9742.8987.7187forward
CNT30272810Asparagus officinalisChenopodium quinoa13.0573.1293.75272forward
CNT30712184Asparagus officinalisGlycine max27.7296.3393.77578forward
CNT30637537Asparagus officinalisCapsicum annuum11.9441.4384.34249forward
CNT30556102Asparagus officinalisOryza glaberrima28.1595.9294.38587forward
CNT30610339Asparagus officinalisGossypium raimondii15.8899.490.33331reverse complement
CNT30714122Asparagus officinalisMalus domestica golden10.8954.9693.83227forward
CNT30627901Asparagus officinalisDaucus carota55.1198.2194.951149forward
CNT30720008Asparagus officinalisTriticum spelta8.270.3795.91171reverse complement
CNT30479986Asparagus officinalisArabidopsis halleri5.949.291.87123reverse complement
CNT30362263Asparagus officinalisSorghum bicolor21.4951.7996.88448forward
CNT30595932Asparagus officinalisOryza meridionalis23.8837.4796.18498forward
CNT30646246Asparagus officinalisCannabis sativa11.4180.6892.86238reverse complement
CNT30148380Asparagus officinalisBrachypodium distachyon15.4923.8295.36323forward
CNT30575742Asparagus officinalisOryza barthii21.3499.3393.93445forward
CNT30116753Asparagus officinalisOryza nivara18.859893.13393forward
CNT30726606Asparagus officinalisLupinus angustifolius56.79100.4291.811184forward

Expression of CNT30318962

Peptides detected in this lncRNA

>peptide 1 (51 aa)
LLRKSEPPVQVQDTIITAWTIRHPTRNRNDPIARAELYQLSYIPPSQVEYA*

>peptide 2 (43 aa)
MASSHSVTGGVYKARERIHRRMADRRLLAIPASCRRVAACNPN*

>peptide 3 (28 aa)
MHHLCPRSRRHPSLSRGFAACQALVRFFS

>peptide 4 (39 aa)
MPKARETPSLSFLFAPHVPPVWRHGDVKSAILSTCSDLG*

>peptide 5 (39 aa)
MIHISGSGADEHIELSMWLRALTAQAQRRNYQGRALPLS*

>peptide 6 (39 aa)
MDSREERSRGGPPRTARIPRVNRKLDLHWISPESPHLSS*

>peptide 7 (39 aa)
YLEKVSHRFRYKILSLPPGQLDIQPVIATTQLQERSSTN*

Sequence

>CNT30318962
ATTACTTAGAAAAAGTGAGCCACCGGTTCAGGTACAAGATACTATCATTACCGCCTGGACAATTAGACATCCAACCCGTAATCGCAACGACCCAATTGCA
AGAGCGGAGCTCTACCAACTGAGCTATATCCCCCCGAGCCAAGTGGAGTATGCATGAAAGAGTCAGATGCTTCTTCTATTCTTTTCCCTGGCGCAGCTGG
GCCATCCTGGACTTGAACCAGAGACCTCGCCCGTGAAGTAAATCATCGCACCTACGATCCAACCAATTGGGAGAGAATCAATAGATTCTTTTTCGGGAGC
GACTCATCCTTCCCGAACGCAGCATACAACTCTCCGTTGTACTGCGCTCTTCAAGTGTGCTTGTTCCCCCTTCTCCCTTACCATGGCAAGTCTTTGTGAA
ATAACTCCGATGGGAAGAAAAAAGAAGGCGTTAAGAGACCTCCTGGCCCAACCCTAGACACTCTAAGATCCTTTTTCAAACCTGCTCCCATTTCGAGTCA
AGAGATAGATAAATAGACACATCCCGTTGCACTGATCGGGGGGCGCTCGTAGTGACTGAGGGGGTCGAAGACCAAGAAGTGAGTTATTTATACCAAGCAT
TCTTCTTATGGCTAGATCCAATCTCCTGGTCCCTGCGGAAAGGAAAAAGAATTTCACGTTCTTCCTTTCGGGAAGGGAGGATTAGGGAAATCCTATTGAT
TGCTGCTTTCTCCAGACCTCCGGGAAAAGCATGAAAAAAAAAGGCTCGAATGGTACGATCCCTCCGTCACCCCAGAATGAAAGGGGTGATCTCGTAGTTC
TTGGTCTGTGAAGATGCGTTGTTAGGTGCTCCATTTTCCCATTGAGGCCGAACCTAAACCTGTGCTCGAGAGATAGCTGTCCATACACTGATAAGGGATG
TATGGATTCTCGAGAAGAGAGGAGCCGCGGTGGTCCCCCCCGGACCGCCCGGATCCCACGAGTGAATAGAAAGTTAGATCTACATTGGATCTCACCTGAA
TCGCCCCATCTATCCTCCTGAGGAGAAGTTTGGTTTCAAACTCCGATTCGAACAGGAGGAGTACGCCATGCTAATGTGCCTTGGATGATCCACATCTCCG
GGTCAGGCGCTGATGAGCACATTGAACTATCCATGTGGCTGAGAGCCCTCACAGCCCAGGCACAACGACGCAATTATCAGGGGCGCGCTCTACCACTGAG
CTAATAGCCCCTCGTGCGGGCCTCCCAGTGGGAGGCCTGCTATGCCAAAAGCGAGAGAAACCCCATCCCTCTCTTTCCTTTTTGCGCCCCATGTCCCTCC
CGTGTGGCGACATGGGGACGTAAAAAGTGCGATCCTATCAACTTGTTCCGACCTAGGATAATAAGCTCATGAGCTTGGTCTTACTTCACCGTCGAGAAAC
GAAAGAAGACTTCAATATCCAAGCTTAGCTCAGACGTAGCTCGCTTCTTTTTGGGTGTGAAGCAGTGTCAAACCAAAATACCCAACAAGCATAAGCATTA
GCTCTCCCTGAAAAGGAGGTGATCCAGCCGCACCTTCCAGTACGGCTACCTTGTTACGACTTCACTCCAGTCACTAGCCCCGCCTTCGGCATCCCCCTCC
TTGCGGTTAAGGTAACGACTTCGGGCATGGCCAGCTCCCATAGTGTGACGGGCGGTGTGTACAAGGCCCGGGAACGAATTCACCGCCGTATGGCTGACCG
GCGATTACTAGCGATTCCGGCTTCATGCAGGCGAGTTGCAGCCTGCAATCCGAACTGAGGACGGGTTTTTGGAGTTAGCTCACCCTCGCGGGATCGCGAC
CCTTTGTCCCGCCCATTGTAGCACGTGTGTCGCCCAGGGCATAAGGGGCATGATGACTTGACGTCATCCTCACCTTCCTCCGGCTTATCACCGGCAGTCT
GTTCAGGGTTCCACACTCAATGGTGGCAACTAAACACGAGGGTTGCGCTCGTTGCGGGACTTAACCCAACACCTTACGGCACGAGCTGACGACAGCCATG
CACCACCTGTGTCCGCGTTCCCGAAGGCACCCCTCTCTTTCAAGAGGATTCGCGGCATGTCAAGCCCTGGTAAGGTTCTTCTCGG