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Detailed information on CNT30318832


BLAST search results

BLAST vs Swiss-Prot:
sp|P20121|PSAH_PEA, E-value = 6e-18

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30673198Asparagus officinalisSetaria viridis5.8352.1986.55119forward
CNT30520893Asparagus officinalisSetaria italica5.9333.1586.78121forward
CNT30532753Asparagus officinalisEucalyptus grandis5.0541.5384.47103forward
CNT30709492Asparagus officinalisGlycine max4.921.1983100forward
CNT30591852Asparagus officinalisMusa acuminata4.4621.8285.7191forward
CNT30241486Asparagus officinalisAvena sativa5.2929.1988.89108forward
CNT30655703Asparagus officinalisTriticum dicoccoides3.9222.2886.2580forward
CNT30131217Asparagus officinalisLolium perenne5.2921.6487.04108forward
CNT30679604Asparagus officinalisTriticum urartu3.9223.8186.2580forward
CNT30149479Asparagus officinalisBrachypodium distachyon4.8525.7185.8699forward
CNT30496965Asparagus officinalisDigitaria exilis5.9335.5986.78121forward
CNT30604128Asparagus officinalisOryza punctata3.7226.2188.1676forward

Expression of CNT30318832

Peptides detected in this lncRNA

>peptide 1 (56 aa)
MGSMSPEAVELRYASKEPPPSIKNLSSKPLLVKGAANVSKNLLCIGPDRTYRYQVP*

>peptide 2 (65 aa)
MPKERLELQALARRTFEFGSEIMRHGQKYVFKGEISVNMQRYSDNKHLSITRSFASSPHHKPEFN*

>peptide 3 (72 aa)
MLRHSNKSIHDHFIPKDFQDTNNSKQRQTKIVPHQNLFNPNAALSYFVCANAGRMSNAKNPQIYLSDTNVLR*

>peptide 4 (74 aa)
MFSKALRRSVAFKGYGFLSSCVSVVFSCRQWNFENEGRENNNNNGALFWQRLICLRRDLSYKPSRGERSNSEVR*

>peptide 5 (29 aa)
MLKTLKFIYLIPMFCVKVHVFRLLDNSEN*

>peptide 6 (47 aa)
MVNDGIVIWCKNYTILSLWVGDVLRHQRSRASKLCIRRFACMFQKST*

>peptide 7 (43 aa)
MFLGTRDHVLRSFVYAGLLVCFRNLLKFNILCPPLTSPESEIT*

>peptide 8 (41 aa)
MLKLSDLLGTAIKKVNTYKLDWEVHINNTSGKTHRELLCRY*

>peptide 9 (30 aa)
MEILFFPKFTIIVCYNKSNILTKSYFIVCK*

Sequence

>CNT30318832
GAAAGAGCTTGCTAACAAGCTGATCCCAGAACATGCGAGGCGTCAATTTGGTCTCAATTTCTTCCATCCAGCGGGCACATAAAACCTTCTCCATGAATCG
AAGGTAAAAAAAAAGCAAGGGAAGCCTTAAACGTTTTTCATGTTTTTCTGTCAAAAGTTTACCCGTTGAGGCTGCTGCTGCACTGGGAAAGCTTAGTTCA
GCAGAGGCTGCTAGTTTGAGGCATCGCGATTATGCTATGAAGCCATCAATAGTTAAGTCACTGTATATTGTATAATAATTGTAGGATACTTGTGGTGAAG
GTGGGAATGGAGTGTGATTCTGGATGTTCAGTAAAGCGCTAAGGAGATCTGTGGCATTTAAGGGGTACGGGTTCCTTAGCAGTTGTGTTTCGGTTGTGTT
CAGCTGCAGACAGTGGAACTTCGAAAATGAAGGTAGGGAAAATAATAACAATAATGGTGCGTTATTTTGGCAACGGCTCATATGCCTAAGGAGAGACTTG
AGTTACAAGCCCTCGCGCGGAGAACGTTCGAATTCGGAAGTGAGATAATGAGGCACGGTCAGAAATACGTCTTCAAAGGGGAAATTAGCGTAAATATGCA
AAGATACTCGGACAATAAACATTTAAGCATTACTCGTTCGTTTGCCTCATCCCCACATCACAAGCCGGAGTTTAATTAAGGAACGCAACATGAAATGTCA
TTCTCACCGCCGCATCACAAGTTTGAGTTTAAACAAGGAACGTAAAATAAAAGACTTGCTGCTGTAAAGAGAAACATGCTCAAACTTTCAGATTTACTCG
GTACAGCGATTAAGAAGGTCAATACTTACAAACTCGATTGGGAAGTACATATCAACAACACAAGCGGGAAAACACATCGAGAATTACTGTGTCGATATTA
GTTATATCTTTCCACGTGGACCAAGCTTCGGTGGGAGCTGAGGCCCTTTCTTGATGGGCAGTATGTCGCCTGAGGCTGTGGAGCTGAGATACGCGAGCAA
GGAGCCTCCTCCGAGTATCAAGAACTTGAGCAGCAAACCCCTCTTGGTGAAAGGAGCTGCAAACGTCTCAAAGAATTTGCTCTGTATTGGTCCGGATAGG
ACTTACAGATATCAGGTACCGTAAGAAATTATGCGAATGTGTAACTAAACCGTAATTTGCCTAGTGTTGTGTTATATCAAACAGGATGAATGTTAAGACA
CTCAAATAAATCAATTCACGACCATTTCATACCAAAAGATTTTCAAGACACAAATAACAGTAAACAGCGCCAAACAAAAATAGTACCACACCAGAACCTA
TTCAACCCAAATGCAGCGCTTTCATATTTTGTTTGTGCAAATGCAGGGCGCATGAGCAATGCTAAAAACCCTCAAATTTATCTATCTGATACCAATGTTC
TGCGTTAAAGTACACGTCTTCAGACTGTTGGATAACAGTGAAAATTGAGCAATATTAGTGCTTATTCCTAGCATTTACGTATTAGAGCATCCCCAACCCA
ACTCCAAAAGCCCATTTTGACGCAAATCCAGCGCCAATTCTTCCTCCAACCCAACGGCAAACTTAGCGTCATTTTAAGGGGGTGCTATAGTACATATGGA
GATTTTGTTTTTTCCCAAGTTTACCATTATAGTTTGTTATAACAAATCAAATATTCTAACCAAATCCTATTTTATAGTTTGTAAATAGAAGAAATATTCT
TTTTGATGTAAAATTTGGTGTAATGGTTAATGATGGAATAGTGATTTGGTGTAAAAACTACACCATTTTGAGTTTGTGGGTTGGAGATGTTCTTAGGCAC
CAGAGATCACGTGCTTCGAAGCTTTGTATACGCCGGTTTGCTTGTATGTTTCAGAAATCTACTTAAATTCAACATATTATGTCCACCGTTAACCAGTCCC
GAAAGTGAAATTACCTGAAGGGGGTTGTAAGGAGAAGGCGCATCGGAGCCATACAGATCCCACTGGCCAGTCGTGTTGCCGATGTCCTCGAGATCAAAGT
ACACGCTCTTGTCTCCGTACTTGGCCACCACGGAATCAGTA