Detailed information on CNT30318721


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30672456Asparagus officinalisSetaria viridis30.2417.0186.6775reverse complement
CNT30521002Asparagus officinalisSetaria italica30.2416.6386.6775forward
CNT30632593Asparagus officinalisVigna unguiculata30.244.4486.6775forward
CNT3093840Asparagus officinalisSolanum tuberosum21.778.7788.8954reverse complement
CNT30569653Asparagus officinalisActinidia chinensis30.2411.188875reverse complement
CNT30554921Asparagus officinalisOryza glaberrima21.7715.388.8954forward
CNT30147394Asparagus officinalisMedicago truncatula30.243.7786.6775forward
CNT30440683Asparagus officinalisAegilops tauschii30.247.7686.6775forward
CNT30577776Asparagus officinalisOryza barthii21.777.2888.8954forward
CNT30582488Asparagus officinalisEchinochloa crusgalli30.246.1886.6775forward
CNT30495774Asparagus officinalisDigitaria exilis29.4418.4386.373reverse complement

Expression of CNT30318721

Peptides detected in this lncRNA

>peptide 1 (49 aa)
RTLPGLDMPRILLKERGAFGNADTGGAWLSSARAVRCWVKSRNERNPRV*

Sequence

>CNT30318721
GAAGAACCTTACCAGGGCTTGACATGCCGCGAATCCTCTTGAAAGAGAGGGGTGCCTTCGGGAACGCGGACACAGGTGGTGCATGGCTGTCGTCAGCTCG
TGCCGTAAGGTGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTCGTGTTTAGTTGCCACCATTGAGTGTGGAACCCTGAACAGACTGCCGGTGATAAGCC
GGAGGAAGGTGAGGATGACGTCAAGTCATCATGCCCCTTATGCCCTGG