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Detailed information on CNT30318671


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30315005Asparagus officinalisCorylus avellana24.65.1583.792forward
CNT30171034Asparagus officinalisTrifolium pratense24.3313.9884.6291forward
CNT3024212Asparagus officinalisPopulus trichocarpa24.614.5183.792forward

Expression of CNT30318671

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MLINGKGVDTIEEKKGFGGIASLVQSLKPLD*

>peptide 2 (31 aa)
MKRNSIFPEAKKKILSSITFSSTYLKYAAKQ*

Sequence

>CNT30318671
GAATCATCGATCTTTAAACATCTGGGTGTTTTGCTTTCACTAAAATTTCTTTAATCGCCGGTGGAAGCAGAGAAAACGATGCTCATTAACGGCAAAGGTG
TTGACACTATTGAGGAAAAGAAAGGCTTTGGTGGCATTGCCTCGCTAGTCCAAAGTCTGAAACCTTTGGATTGAAGAATTCATCAAGAAGAATATTTTGA
GGCTTGATGTCGAAATGTACAATCTTCATATCACAACCACGGTTGTCAGGCACAAATGAAAAGGAATAGTATTTTTCCTGAAGCAAAAAAGAAAATTTTA
AGTTCAATTACATTCTCATCCACATACCTGAAATATGCGGCAAAGCAATAGCCAAAAGTTTTACTGTCACCGAT