Detailed information on CNT30318666


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30177674Asparagus officinalisSecale cereale84.0736.493.91739reverse complement
CNT30221081Asparagus officinalisHordeum vulgare75.7732.8993.24666forward
CNT30384202Asparagus officinalisTriticum turgidum81.3443.1894.13715reverse complement
CNT30203206Asparagus officinalisHelianthus annuus48.6985.0998.36428forward
CNT30684661Asparagus officinalisTriticum urartu83.3917.3294.82733reverse complement
CNT30371428Asparagus officinalisOryza glumipatula21.2729.9291.44187forward
CNT30646085Asparagus officinalisCannabis sativa27.5355.592.56242forward

Expression of CNT30318666

Peptides detected in this lncRNA

>peptide 1 (51 aa)
PRRTLPGLDMPRILLKERGAFGNADTGGAWLSSARAVRCWVKSRNERNPRV*

>peptide 2 (30 aa)
MTSSHHAPYALGDTRATMGGTKGRDPARVS*

>peptide 3 (31 aa)
MGAGHARSRYLNRKEGDAEGGASDWSEVVTR*

>peptide 4 (39 aa)
MKPESLVIAGQPYGGEFVPGPCTHRPSHYGSWPCPKSLP*

>peptide 5 (34 aa)
MSPHGRDMGRKKEREGWGFSRFWHSRPPTGRPARG

Sequence

>CNT30318666
CCGAGAAGAACCTTACCAGGGCTTGACATGCCGCGAATCCTCTTGAAAGAGAGGGGTGCCTTCGGGAACGCGGACACAGGTGGTGCATGGCTGTCGTCAG
CTCGTGCCGTAAGGTGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTCGTGTTTAGTTGCCACCATTGAGTGTGGAACCCTGAACAGACTGCCGGTGATA
AGCCGGAGGAAGGTGAGGATGACGTCAAGTCATCATGCCCCTTATGCCCTGGGCGACACACGTGCTACAATGGGCGGGACAAAGGGTCGCGATCCCGCGA
GGGTGAGCTAACTCCAAAAACCCGTCCTCAGTTCGGATTGCAGGCTGCAACTCGCCTGCATGAAGCCGGAATCGCTAGTAATCGCCGGTCAGCCATACGG
CGGTGAATTCGTTCCCGGGCCTTGTACACACCGCCCGTCACACTATGGGAGCTGGCCATGCCCGAAGTCGTTACCTTAACCGCAAGGAGGGGGATGCCGA
AGGCGGGGCTAGTGACTGGAGTGAAGTCGTAACAAGGTAGCCGTACTGGAAGGTGCGGCTGGATCACCTCCTTTTCAGGGAGAGCTAATGCTTATGCTTG
TTGGGTATTTTGGTTTGACACTGCTTCACACCCAAAAAGAAGCGAGCTACGTCTGAGCTAAGCTTGGATATTGAAGTCTTCTTTCGTTTCTCGACGGTGA
AGTAAGACCAAGCTCATGAGCTTATTATCCTAGGTCGGAACAAGTTGATAGGATCGCACTTTTTACGTCCCCATGTCGCCACACGGGAGGGACATGGGGC
GCAAAAAGGAAAGAGAGGGATGGGGTTTCTCTCGTTTTTGGCATAGCAGGCCTCCCACTGGGAGGCCCGCACGAGGGGA