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Detailed information on CNT30318651


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30671184Asparagus officinalisSetaria viridis44.2526.6980.67150forward
CNT30535437Asparagus officinalisEucalyptus grandis39.2337.2580.45133forward
CNT30730253Asparagus officinalisCorchorus capsularis22.7116.9284.4277forward
CNT30159576Asparagus officinalisPistacia vera23.019.8585.978forward
CNT3094036Asparagus officinalisSolanum tuberosum20.067.1191.1868forward
CNT30190473Asparagus officinalisSecale cereale33.6315.182.46114forward
CNT30221631Asparagus officinalisHordeum vulgare27.436.6783.8793forward
CNT30387873Asparagus officinalisTriticum turgidum45.1330.1279.74153forward
CNT30568277Asparagus officinalisActinidia chinensis19.472286.3666forward
CNT30592144Asparagus officinalisMusa acuminata23.8935.2285.1981forward
CNT30437070Asparagus officinalisAegilops tauschii45.1330.9781.7153forward
CNT30139319Asparagus officinalisLolium perenne33.639.7481.58114forward
CNT30227632Asparagus officinalisAnanas comosus46.6123.4483.54158forward
CNT30681057Asparagus officinalisTriticum urartu45.1315.0181.7153forward
CNT30362596Asparagus officinalisSorghum bicolor45.1325.8983.01153forward
CNT30355349Asparagus officinalisLactuca sativa23.613.3383.7580forward
CNT30331328Asparagus officinalisDioscorea rotundata23.315.486.0879forward
CNT30115855Asparagus officinalisOryza nivara44.8442.784.21152forward

Expression of CNT30318651

Peptides detected in this lncRNA

>peptide 1 (67 aa)
GDAGGAVDKNKDHPPKSPSDTKNPDAATIRISAKLRVGLVFVPDNGSNRYVQKQQRRYELSDHRPVK*

Sequence

>CNT30318651
GGAGATGCCGGCGGTGCAGTAGACAAGAATAAAGATCATCCCCCCAAAAGCCCAAGCGATACCAAGAATCCCGACGCCGCTACAATCCGCATCAGCGCTA
AGCTTCGGGTCGGACTGGTGTTTGTACCCGATAACGGTAGCAACCGTTATGTACAGAAACAGCAACGTCGCTATGAACTCAGCGATCACCGCCCGGTAAA
ATGACCACTTGGTCAGCTCCACTGCGTCTATAAGTGGAGCTGGCGGTGGGTCGGTGTAGTCCTTGGCGGTAAACTGACCGGCGGCGCCCTCAACGTCTTT
GGCCATTGTTTTAGAGTTTCTTTTCTTTTCTTTTCGGCT