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Detailed information on CNT30318584


BLAST search results

BLAST vs Swiss-Prot:
sp|A2YWQ1|HSP81_ORYSI, E-value = 0.0

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30675624Asparagus officinalisSetaria viridis21.9142.1686.47266forward
CNT30378101Asparagus officinalisArabidopsis thaliana46.8764.5184.01569forward
CNT3019808Asparagus officinalisCitrullus lanatus23.5642.6987.41286forward
CNT30187977Asparagus officinalisSecale cereale23.2339.0686.17282forward
CNT30566784Asparagus officinalisActinidia chinensis23.3937.3784.86284forward
CNT30145670Asparagus officinalisMedicago truncatula11.7835.1489.51143forward
CNT30606420Asparagus officinalisGossypium raimondii27.5158.4984.43334forward
CNT30212755Asparagus officinalisHelianthus annuus11.8657.1481.94144forward
CNT30126131Asparagus officinalisCorymbia citriodora15.1632.1784.24184forward
CNT30477326Asparagus officinalisArabidopsis halleri55.5276.2482.64674forward
CNT3055928Asparagus officinalisAmborella trichopoda16.3122.5585.35198forward
CNT30551470Asparagus officinalisOryza brachyantha29.4982.385.2358forward

Expression of CNT30318584

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MLRGRSSESTIPLTKLKYSGMISSQLSMMKTRRT*

>peptide 2 (65 aa)
QLQHPMNPIPERVRIVKAKPRGQQRCLIQQHHKILHRFIVLISLRSLPQLVHDRVLRINLHRLLA*

>peptide 3 (66 aa)
MLNSKMLFPVVCETLVEGSILFLGDFLGLSHPDRLLFVDESPLMGNLLDLLLFLLFLFLLLIDIFYL

>peptide 4 (90 aa)
MFAVHPYSPVTKQHGESTTRSETTTFSTLSPRTSLITLQRPSNFSFSSSFFFFSSSLSSSFNPSFVAETSFLPSNSLSCPTAYSSMASTM*

Sequence

>CNT30318584
CCAACTTCAACATCCTATGAATCCTATTCCCGAACGTGTTAGGATCGTCAAGGCTAAACCCAGAGGTCAACAGCGATGTCTCATACAGCAACATCACAAG
ATCCTTCACCGATTTATCGTTCTTATCAGCCTCCGCTCTCTTCCTCAGCTCGTCCATGATCGCGTTCTCAGGATTAATCTCCATCGTCTTCTTGCTTGAC
ATGTAACCAGCCATGCTTGAATCTCTCAAAGCTTGAGCCTTCATTATACGCTCCATGTTCGCAGTCCATCCGTACTCACCGGTGACCAAGCAGCATGGAG
AGTCGACGACACGGTCAGAGACAACAACCTTCTCCACTTTGTCTCCAAGGACCTCTTTGATTACTTTGCAAAGACCCTCGAATTTCTCTTTCAGCTCTTC
CTTCTTTTTCTTCTCGTCTTCGCTCTCCTCAAGTTTTAATCCCTCTTTCGTTGCAGAGACGAGCTTCTTGCCTTCAAATTCCTTGAGTTGCCCAACTGCA
TACTCGTCGATGGCATCAACCATGTAGAGGACCTCGTAGCCTTTCTTTTTAAGCTTCTCGAGGAATGGGGAGTTTTCAACAGCCTTCTTGCTTTCTCCAG
TAATGTAGTAGATATCACTCTGGCCTTCCTTCATTCTCGTTACATAATCTTTGAGGCTGGTAAGTTCATCACCGCTCTTGGTAGAGTGATATCTTAGCAG
CTCGGCGATCTTGGCCTTGTTTGTGGAGTCCTCGTGGATTCCGAGCTTGAGGTTCTTGCGGATAACCTTCAGGATCTTGTTCTGTTGTAGCATCTCTCTT
GAGATGTTAAGGGGGAGGTCCTCAGAGTCGACGATTCCCTTAACAAAGCTCAAGTACTCGGGGATGATCTCTTCACAGTTGTCCATGATGAAGACACGGC
GAACATAGAGCTTGATGTTGTTTGGCTTCTTCTTTGTGTCGAAGAGATCAAATGGAGCTCTCTTGGGCACAAAGAGGACAGCTTTGAATTCCAGCTGACC
CTCAACTGAGAAATGCTTAACAGCAAGATGCTCTTCCCAGTCGTTTGTGAGACTCTTGTAGAAGGCAGCATACTCTTCCTTGGTGATTTCCTCGGGCTTT
CTCATCCAGATAGGCTTCTGTTTGTTGACGAGAGCCCACTCATGGGAAACCTCCTTGATCTTCTTCTTTTTCTTCTCTTTCTCTTCCTTCTCCTCATCGA
CATCTTCTACCTTG