Detailed information on CNT3031830


BLAST search results

BLAST vs Swiss-Prot:
sp|Q39654|PSAL_CUCSA, E-value = 9e-62

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30639966Theobroma cacaoNymphaea colorata28.496.9381.73104forward
CNT30516757Theobroma cacaoJuglans regia49.3236.3686.11180forward
CNT30376200Theobroma cacaoArabidopsis thaliana27.1210.2682.8399forward
CNT3021623Theobroma cacaoCitrullus lanatus42.7411.4984.62156forward
CNT30629841Theobroma cacaoVigna unguiculata55.3434.5383.66202forward
CNT30507460Theobroma cacaoNicotiana attenuata52.3363.0484.29191forward
CNT30710011Theobroma cacaoGlycine max53.4245.1483.59195forward
CNT3042792Theobroma cacaoPrunus dulcis27.1226.8386.8799forward
CNT3094368Theobroma cacaoSolanum tuberosum39.4555.684.03144forward
CNT30564216Theobroma cacaoActinidia chinensis43.2970.8582.91158forward
CNT3084712Theobroma cacaoVigna radiata41.6453.7184.87152forward
CNT30172489Theobroma cacaoTrifolium pratense26.857.688.7898forward
CNT30129085Theobroma cacaoCorymbia citriodora32.3311.2183.9118forward
CNT30359901Theobroma cacaoLactuca sativa24.1112.9886.3688forward
CNT30154501Theobroma cacaoPrunus persica40.2747.1286.39147forward
CNT3037832Theobroma cacaoCucumis melo96.9942.0478.81354forward
CNT30726871Theobroma cacaoLupinus angustifolius69.3214.0982.61253forward
CNT3049017Theobroma cacaoCucumis sativus96.4435.8878.98352forward

Expression of CNT3031830

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MVLQGGIHGPDPPRFPSEVGSLLSCKPGGWRGTKQSMGLM*

>peptide 2 (84 aa)
GSFFRPVKVKEGAVDGSPSLNDATPYIDKQMLSITTRPAAARLPAPPATGVLLKGPALTNGPTRRNPWARPTSIPLRSGLTAVL*

>peptide 3 (31 aa)
MGQTHLDSPQKWAHCCPVSREVGEVPSNQWA*

Sequence

>CNT3031830
CTGGCTCCTTCTTCCGCCCAGTCAAGGTTAAAGAAGGTGCGGTGGATGGCTCTCCTTCCTTAAACGATGCAACTCCGTACATTGACAAGCAAATGCTTAG
TATAACCACAAGACCAGCAGCTGCCAGGCTTCCTGCTCCCCCAGCGACGGGGGTGCTCCTCAAAGGCCCTGCCTTAACAAATGGTCCTACAAGGAGGAAT
CCATGGGCCAGACCCACCTCGATTCCCCTCAGAAGTGGGCTCACTGCTGTCCTGTAAGCCGGGAGGTTGGAGAGGTACCAAGCAATCAATGGGCTTGATG
TGATTGGGGTTTCTAGGCTTCCAATAAATGGGTCACCATTGATGGGCTGAATTACTTGGTACGTT