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Detailed information on CNT30318212


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT004405, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30640117Corylus avellanaNymphaea colorata67.5290.4396.641815forward
CNT30519047Corylus avellanaJuglans regia69.2796.3398.931862reverse complement
CNT30702609Corylus avellanaQuercus lobata68.3499.8498.421837reverse complement
CNT30283192Corylus avellanaChenopodium quinoa68.5387.4697.121842forward
CNT3021658Corylus avellanaCitrullus lanatus66.07100.0698.371776forward
CNT30628671Corylus avellanaVigna unguiculata67.6362.297.691818forward
CNT30200773Corylus avellanaPisum sativum67.661.8497.521817reverse complement
CNT30506608Corylus avellanaNicotiana attenuata69.2372.4195.971861reverse complement
CNT3047196Corylus avellanaPrunus dulcis68.8677.4897.411851reverse complement
CNT30638988Corylus avellanaCapsicum annuum67.7595.5997.581821forward
CNT30544406Corylus avellanaBrassica napus67.6391.2296.921818reverse complement
CNT30309594Corylus avellanaCamelina sativa67.393.6397.131809forward
CNT3083352Corylus avellanaBrassica juncea67.6399.0296.921818forward
CNT30422282Corylus avellanaPapaver somniferum68.958.6897.081852forward
CNT3025914Corylus avellanaPopulus trichocarpa66.85100.1797.831797reverse complement
CNT30326143Corylus avellanaAsparagus officinalis67.6359.0397.141818reverse complement
CNT30334962Corylus avellanaCynara cardunculus68.5649.1394.631843reverse complement

Expression of CNT30318212

Peptides detected in this lncRNA

>peptide 1 (50 aa)
PFCSRAILSLSCPAVLARRHPMLLHAQLALVAGWVVVRLVMLWLSVRDGM*

>peptide 2 (47 aa)
MGGGAWPFLVGGAICLVNSVNERDLSLLTSYAEVTLRGQLLRGTMAA*

>peptide 3 (44 aa)
MHLLDKRSTRALPVALMIHDNSTDRTAIVPATHHSNFCPINFRW*

>peptide 4 (40 aa)
FLFARARYLVYHAQRSWLGVTRCFCMLNSHSWLVGLWFVW*

>peptide 5 (36 aa)
MPSGLGSASPDASACSTRTRGWLGCGSFGDAVAECA*

>peptide 6 (36 aa)
MITRRIARPSCRRRIIQISALSTFDGRIEAYYGGDG*

>peptide 7 (33 aa)
MPTRDRRMLLSGLRRHLMRNQSLWVPGGVWSQG*

>peptide 8 (52 aa)
MINRNSRGHSYFIVRGEILGFMKDEQLRKHLPRMFSLIKNESWGLEDDQIPS*

>peptide 9 (83 aa)
MQKVLWVWGPTASVCPNQAYTHDCCARPRSLTPYGRVKVLCGAGIEKECYLVDPASSHMLVSKIKPCMCKYELIQTVKLRMAH*

Sequence

>CNT30318212
TTCCTTTTTGCTCGCGCGCGATACTTAGTTTATCATGCCCAGCGGTCTTGGCTCGGCGTCACCCGATGCTTCTGCATGCTCAACTCGCACTCGTGGCTGG
TTGGGTTGTGGTTCGTTTGGTGATGCTGTGGCTGAGTGTGCGTGACGGCATGTGAGTGGTGGTAGGGTTGTTCGGCTTGGCAGGCTCTTTGCTTGCGCAT
TGAACTGTTGAGTGTGCTCCCCCTCATTGTTTCTCCGAGTGTCGTCGACACCACGGGGGGTTCATGGGTTCCTGTGTTGCATACCTTCGTTGACGGAATT
CGTTCCCTTGTTGACATTTTCCATGCCAGCCCCCGGTTGGTGGTTGGCAGGGCCTTGAACTTGTCTACGTGCAACCGTGCATACCACGCGTCGTTGCGTC
TTTGTCACGGATCACGTGGGCAATCTCGTGCTCTCGGATGCAGAAAGTTTTGTGGGTTTGGGGGCCTACGGCCTCCGTTTGCCCAAACCAAGCGTACACG
CACGATTGTTGCGCCCGCCCTCGATCTTTAACCCCTTACGGGCGTGTCAAGGTCTTGTGCGGTGCCGGCATCGAGAAGGAATGCTACCTGGTTGATCCTG
CCAGTAGTCATATGCTTGTCTCAAAGATTAAGCCATGCATGTGTAAGTATGAACTAATTCAGACTGTGAAACTGCGAATGGCTCATTAAATCAGTTATAG
TTTGTTTGATGGTATCTGCTACTCGGATAACCGTAGTAATTCTAGAGCTAATACGTGCAACAAACCCCGACTTCTGGAAGGGATGCATTTATTAGATAAA
AGGTCGACGCGGGCTCTGCCCGTTGCTCTGATGATTCATGATAACTCGACGGATCGCACGGCCATCGTGCCGGCGACGCATCATTCAAATTTCTGCCCTA
TCAACTTTCGATGGTAGGATAGAGGCCTACTATGGTGGTGACGGGTGACGGAGAATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCACA
TCCAAGGAAGGCAGCAGGCGCGCAAATTACCCAATCCTGACACGGGGAGGTAGTGACAATAAATAACAATACCGGGCTCTTATGAGTCTGGTAATTGGAA
TGAGTACAATCTAAATCCCTTAACGAGGATCCATTGGAGGGCAAGTCTGGTGCCAGCAGCCGCGGTAATTCCAGCTCCAATAGCGTATATTTAAGTTGTT
GCAGTTAAAAAGCTCGTAGTTGGATCTTGGGTTGGGCAGATCGGTCCGCCCCTGGTGTGCACCGGTCCGCTCGTCCCTTCTACCGGCGATACGCTCCTGG
TCTTAATTGGCCGGGTCGTGCCTCCGGTGCTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCATGGGATAACATC
ATAGGATTTCGGTCCTATTGTGTTGGCCTTCGGGATCGGAGTAATGATTAACAGGAACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTT
GGATTTATGAAAGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCAAGAACGAAAGTTGGGGGCTCGAAGACGATCAGATACCGTCCT
AGTCTCAACCATAAACGATGCCGACCAGGGATCGGCGGATGTTGCTTTCAGGACTCCGCCGGCACCTTATGAGAAATCAAAGTCTTTGGGTTCCGGGGGG
AGTATGGTCGCAAGGCTGAAACTTAAAGGAATTGACGGAAGGGCACCACCAGGAGTGGAGCCTGCGGCTTAATTTGACTCAACACGGGGAAACTTACCAG
GTCCAGACATAGTAAGGATTGACAGACTGAGAGCTCTTTCTTGATTCTATGGGTGGTGGTGCATGGCCGTTCTTAGTTGGTGGAGCGATTTGTCTGGTTA
ATTCCGTTAACGAACGAGACCTCAGCCTGTTAACTAGCTATGCGGAGGTGACCCTCCGCGGCCAGCTTCTTAGAGGGACTATGGCCGCTTAGGCCACGGA
AGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATGTATTCAACGAGTTTATAGCCTTGGCCGACAGGC
CCGGGTAATCTTTGAAATTTCATCGTGATGGGGATAGATCATTGCAATTGTTGGTCTTCAACGAGGAATTCCTAGTAAGCGCGAGTCATCAGCTCGCGTT
GACTACGTCCCTGCCCTTTGTACACACCGCCCGTCGCTCCTACCGATTGAATGGTCCGGTGAAGTGTTCGGATCGCGGCGACGTGGGCGGTTCGCTGCCG
GCGACGTCGCGAGAAGTCCACTGAACCTTATCATTTAGAGGAAGGAGAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATTGTCGAAAC
CTGCCCAGCAGAACGACCCGCGAACTTGTATAAACAACCGGGGGCGGGGGGCGTTCTCGCCCCGTGCCCCCGAACGGCGGGGAGACACTCGTGCCTTCTT
GCCGAACAACGAACCCCGGAGAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATTGTCGAAACCTGCCCAGCAGAACGACCCGCGAACT
TGTATAAACAACCGGGGGCGGGGGGCGTTCTCGCCCCGTGCCCCCGAACGGCGGGGAGACACTCGTGCCTTCTTGCCGAACAACGAAC