Detailed information on CNT30318042


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30516848Corylus avellanaJuglans regia30.3314.1985.9464forward
CNT30703016Corylus avellanaQuercus lobata27.019.992.9857forward
CNT30718107Corylus avellanaMalus domestica golden22.7511.1189.5848forward
CNT30152079Corylus avellanaPrunus persica22.7512.493.7548forward
CNT30570366Corylus avellanaVitis vinifera28.4411.7988.3360forward
CNT3026892Corylus avellanaPopulus trichocarpa59.2422.4483.2125forward
CNT30120150Corylus avellanaCitrus clementina27.019.387.7257forward

Expression of CNT30318042

Peptides detected in this lncRNA

>peptide 1 (56 aa)
LTITGFFPLWPVCTDTPPLPTPTLVPPGFPFPVSTPTPPFPTLTEVPPGFPFPAST*

>peptide 2 (69 aa)
LDNHRLLSLVACVHRYSSFANTDTGAPGLSFSSINSDATLPYINGSASGLPFSGVNMNTALPHINGSALP

Sequence

>CNT30318042
CCTTGACAATCACAGGCTTCTTTCCCTTGTGGCCTGTGTGCACAGATACTCCTCCTTTGCCAACACCGACACTGGTGCCCCCGGGCTTTCCTTTTCCAGT
ATCAACTCCGACGCCACCCTTCCCTACATTAACGGAAGTGCCTCCGGGCTTCCCTTTTCCGGCGTCAACATGAACACCGCCCTTCCCCACATCAACGGAA
GTGCTCTTCCC