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Detailed information on CNT30318007


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT004405, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30639740Corylus avellanaNymphaea colorata62.3764.5793.92180forward
CNT30531232Corylus avellanaEucalyptus grandis79.4381.9695.172776reverse complement
CNT30550163Corylus avellanaIpomoea triloba4374.3797.541503reverse complement
CNT30519180Corylus avellanaJuglans regia79.3483.8598.022773reverse complement
CNT30619309Corylus avellanaSesamum indicum50.780.6695.321772forward
CNT30283199Corylus avellanaChenopodium quinoa60.2677.496.532106reverse complement
CNT3021656Corylus avellanaCitrullus lanatus79.2645.7596.532770reverse complement
CNT30730436Corylus avellanaCorchorus capsularis40.46100.4395.91414reverse complement
CNT3072442Corylus avellanaQuercus suber49.73100.1294.531738reverse complement
CNT30632395Corylus avellanaVigna unguiculata79.691.9495.042782reverse complement
CNT30195048Corylus avellanaPisum sativum79.4373.8194.812776reverse complement
CNT30508033Corylus avellanaNicotiana attenuata79.6683.693.682784reverse complement
CNT30711135Corylus avellanaGlycine max77.2584.9995.812700reverse complement
CNT3047217Corylus avellanaPrunus dulcis61.3260.2194.772143reverse complement
CNT30383013Corylus avellanaTriticum turgidum61.881.3992.412160reverse complement
CNT30588049Corylus avellanaMusa acuminata47.3277.3694.681654reverse complement
CNT30312195Corylus avellanaCamelina sativa49.1368.8594.71717forward
CNT30445720Corylus avellanaSaccharum spontaneum46.4976.494.651625forward
CNT30210115Corylus avellanaHelianthus annuus79.7739.1489.712788reverse complement
CNT30355977Corylus avellanaLactuca sativa43.7587.3294.381529reverse complement
CNT30434075Corylus avellanaPapaver somniferum75.6598.5194.142644reverse complement
CNT3023562Corylus avellanaPopulus trichocarpa46.2172.3697.211615forward
CNT3035495Corylus avellanaCucumis melo79.7452.9196.162787reverse complement
CNT30583181Corylus avellanaEchinochloa crusgalli60.4990.1993.762114reverse complement
CNT30335982Corylus avellanaCynara cardunculus76.2281.1790.472664forward

Expression of CNT30318007

Peptides detected in this lncRNA

>peptide 1 (86 aa)
MCKCRSHGTFPLFGLQSSHLNICYYHQDLHRRPLRPGSRPRFCSDRRALLLIGAWRLPRRPGIGRALQRHPFSGLVDSAGELLHTP*

>peptide 2 (37 aa)
MAHLELSIPWRGSTKQPRRPTYLKFENRSRALRPRCL*

>peptide 3 (38 aa)
MCRPSQTPHLTMSSARIGPPRQALGPKRGAMPRFRFTE*

>peptide 4 (61 aa)
GSSVAYLSRLQRILPAARWKLNFKAARAARPPRGLHQRHVPLGAEAPTAGRQSGDGRTRRF*

>peptide 5 (47 aa)
MSDSLVRVSRRAEWGARRPTPGARRCRSTPRRRVLPTTIAATTSPRA*

>peptide 6 (53 aa)
MSTTGRGRYSVLRIFKGRRGRTGHHAKCGALPAAGPYLRLSRFQGGQAVKQKR*

>peptide 7 (87 aa)
MIGRADIEGSKSNVAMNAWLPQASYPCGNFSDTSGFKFRRSKGSIGHAFTVRIRTGNQNQTSFYPFVPHEISVLVELILGHLRLKDR*

>peptide 8 (36 aa)
MLTLEPFSEDQGQSAVQPSRGSRQSASLRLTGLLAR*

>peptide 9 (66 aa)
LLRRVFKSSAKDSTRRSVEIKLQGGPRGSSAARASPTTRAFGGRGPYCRSAIGRRAHASLLARILT*

Sequence

>CNT30318007
GGCTCCTCCGTCGCGTATTTAAGTCGTCTGCAAAGGATTCTACCCGCCGCTCGGTGGAAATTAAACTTCAAGGCGGCCCGCGCGGCTCGTCCGCCGCGAG
GGCTTCACCAACGACACGTGCCTTTGGGGGCCGAGGCCCCTACTGCAGGTCGGCAATCGGGCGACGGGCGCACGCGTCGCTTCTAGCCCGGATTCTGACT
TAGAGGCGTTCAGTCATAATCCAGCGCACGGTAGCTTCGCGCCACTGGCTTTTCAACCAAGCGCGATGACCAATTGTGCGAATCAACGGTTCCTCTCGTA
CTAGGTTGAATTACTATTGCGACACTGTCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTATTGGTGGGTGAAC
AATCCAACACTTGGTGAATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCA
GTTATCCCTGTGGTAACTTTTCTGACACCTCTGGCTTCAAATTCCGAAGGTCTAAAGGATCGATAGGCCACGCTTTCACGGTTCGTATTCGTACTGGAAA
TCAGAATCAAACGAGCTTTTACCCTTTTGTTCCACACGAGATTTCTGTTCTCGTTGAGCTCATCTTAGGACACCTGCGTCTAAAGGATCGATAGGCCACG
CTTTCACGGTTCGTATTCGTACTGGAAATCAGAATCAAACGAGCTTTTACCCTTTTGTTCCACACGAGATTTCTGTTCTCGTTGAGCTCATCTTAGGACA
CCTGCGTTATCTTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCCGCCCGGATCGGCCCGCCGAGGCAGGCCTTGGGTCCAAA
AAGAGGGGCAATGCCCCGCTTCCGATTCACGGAATAAGTAAAATAACGTTAAAAGTAGTGGTATTTCACTTTCGCCTTTCGGCTCCCACTTATCCTACAC
CTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCT
GGATAGTAGACAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACT
CCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTGAGCATCCGCAGGGACCATCGCAATG
CTTTGTTTTAATTAAACAGTCGGATTCCCCTTGTCCGTACCAGTTCTGAGTTGACTGTTCGACGCCCGGGGAAGACCGCCGAAGCGATCGTTCCCAGTCC
GTCCCCCGGCCGGCACGCGGCGACCCGCTCTCGCCGCGGAAGCAGCTCGAGCAGTCCACCGACAGCCGACGGGTTCGGGACTGGGACCCCCGTGCCCAGC
CCTCAGAGCCAATCCTTTTCCCGAGGTTACGGATCCATTTTGCCGACTTCCCTTGCCTACATTGTTCCATTGGCCAGAGGCTGTTCACCTTGGAGACCTG
ATGCGGTTATGAGTACGACCGGGCGTGGAAGGTACTCGGTCCTCCGGATTTTCAAGGGCCGCCGGGGGCGCACCGGACACCACGCGAAGTGCGGTGCTCT
TCCAGCCGCTGGACCCTACCTCCGGCTGAGCCGTTTCCAGGGTGGGCAGGCTGTTAAACAGAAAAGATAACTCTTCCCGAGGCCCCCGCCGACGTCTCCG
GACTCCCTAACGTTGCCGTCAACCGCCACGTCCCGGTTCAGGAATTTTAACCCGATTCCCTTTCGAAGCTCGCGTGCAGCACGCTATCAGACGGGCTTCC
CCCGTCTCTTAGGATCGACTAACCCATGTGCAAGTGCCGTTCACATGGAACCTTTCCCCTCTTCGGCCTTCAAAGTTCTCATTTGAATATTTGCTACTAC
CACCAAGATCTGCACCGACGGCCGCTCCGCCCGGGCTCGCGCCCCAGGTTTTGCAGCGACCGCCGCGCCCTCCTACTCATCGGGGCCTGGCGCTTGCCCC
GACGGCCGGGTATAGGTCGCGCGCTTCAGCGCCATCCATTTTCGGGGCTAGTTGATTCGGCAGGTGAGTTGTTACACACTCCTTAGCGGATTTCGACTTC
CATGACCACCGTCCTGCTGTCTTAATCGACCAACACCCTTTGTGGGTTCTAGGTTAGCGCGCAGTTGGGCACCGTAACCCGGCTTCCGGTTCATCCCGCA
TCGCCAGTTCTGCTTACCAAAAATGGCCCACTTGGAGCTCTCGATTCCTTGGCGCGGCTCAACAAAGCAGCCGCGCCGTCCTACCTATTTAAAGTTTGAG
AATAGGTCGAGGGCGTTGCGCCCCCGATGCCTCTAATCATTGGCTTTACCCGATAGAACTCGCACGTGGGCTCCAGCTATCCTGAGGGAAACTTCGGAGG
GAACCAGCTACTAGACGGTTCGATTAGTCTTTCGCCCCTATACCCAAGTCAGACGAACGATTTGCACGTCAGTATCGCTGCGGGCCTCCACCAGAGTTTC
CTCTGGCTTCGCCCCGCTCAGGCATAGTTCACCATCTTTCGGGTCCCGACAGGTATGCTCACACTCGAACCCTTCTCAGAAGATCAAGGTCAGTCGGCGG
TGCAACCCTCTAGGGGATCCCGCCAATCAGCTTCCTTGCGCCTTACGGGTTTACTAGCCCGTTGACTCGCACACATGTCAGACTCCTTGGTCCGTGTTTC
AAGACGGGCCGAATGGGGAGCCCGCAGGCCGACGCCAGGAGCACGCAGATGCCGAAGCACGCCTAGACGGCGCGTGCTGCCCACCACGATCGCGGCAACG
ACGTCTCCACGGGCATAACTACAGCCCGGGCTTGGGCCGCCGCCGCAATCCGCATCGGTCCACGCCCCGAGTCGATCGGCAGACCGGCTTGTCACCGTTC
CACATCCGACCGGGGCGCATCGCCGGCCCCCATCCGCTTCCCTCCCGACAATTTCAAGCACTCTTTGACTCTCTTTTCAAAGTCCTTTTCATCTTTCCCT
CGCGGTACTTGTTTGCTATCGGTCTCTCGCCCATATTTAGCCTTGGACGGAATTTACCGCCCGATTGGGGCTGCATTCCCAAACAACCCGACTCGCCGAC
AGCGCCTCGTGGTGCGACAGGGTCCGGGCACGACGGGGCTCTCACCCTCTCCGGCGCCCCCTTCCAGGGGACTTGGGCCCGGTCCGCCGCTGAGGACGCT
TCTCCAGACTACAATTCAGACGCCGAGCGGCGCCCGATTCTCAAGCTGGGCTTAGATCCCGGTTCGCTCGCCGTTACTAAGGGAATCCTTGTAAGTTTCT
TTTCCTCCGCTTATTGATATGCTTAAATTCAGCGGGTAGTCCCGCCTGACCTGGGGTCGCGTTGGAAGAGTCGCGAGCGCGACGCTACAGGGTCA