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Detailed information on CNT3031793


BLAST search results

BLAST vs Swiss-Prot:
sp|P69309|UBIQP_AVEFA, E-value = 0.0

BLAST vs NONCODE:
NONTPRT002153, E-value = 1e-67

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30728102Theobroma cacaoCorchorus capsularis76.2462.1888.58937forward
CNT30169911Theobroma cacaoPistacia vera74.1349.1185.4911forward

Expression of CNT3031793

Peptides detected in this lncRNA

>peptide 1 (45 aa)
MSLCWSGGIPSLSWILALTLSMVSELSTSRVMVLPVRVFTKICIF*

>peptide 2 (61 aa)
MSRCWSGGMPSLSWILALTLSIVSELSTSRVMVLPVKVLTKICIPPRRRRTRWRVDSFWML*

>peptide 3 (67 aa)
DKKRSANFYSILRLTSYKCDKTQISNIKEKEKKALPYYDSILNLKQRQNLSFRTITAHHGDEGQGGG*

Sequence

>CNT3031793
GATAAGAAAAGATCAGCAAACTTTTATTCCATACTTAGATTAACATCTTACAAATGCGATAAGACCCAGATATCAAACATTAAAGAAAAAGAAAAAAAGG
CACTTCCTTATTATGACAGTATCTTAAATTTAAAACAACGACAAAACCTTTCCTTTAGAACAATCACTGCCCACCACGGAGACGAAGGACAAGGTGGAGG
GTAGACTCTTTCTGAATGTTATAATCAGCTAAAGTCCTCCCATCCTCCAATTGCTTCCCGGCAAAGATAAGCCTTTGCTGATCTGGGGGGATTCCTTCCT
TATCCTGAATCTTTGCCTTGACATTATCGATTGTATCCGAACTTTCCACCTCCAAGGTGATTGTTTTTCCAGTCAAGGTCTTGACAAAAATCTGCATTCC
TCCACGAAGCCTCAAAACAAGATGAAGGGTTGATTCCTTTTGTATGTTGTAATCAGCCAAGGTCCTCCCGTCCTCAAGCTGCTTCCCAGCGAAGATCAAT
CGTTGTTGGTCTGGTGGGATCCCTTCCTTATCTTGGATCTTGGCCTTAACGTTATCAATCGTGTCCGAGCTCTCGACCTCCAGGGTTATAGTCTTTCCTG
TCAAGGTTTTGACAAAGATTTGCATGCCTCCACGGAGCCTGAGGACAAGGTGGAGAGTCGACTCCTTTTGGATATTATAATCAGCCAAAGTACGGCCGTC
CTCCAGCTGTTTCCCGGCGAAGATGAGCCGCTGTTGGTCGGGAGGGATGCCTTCTTTGTCCTGGATTTTGGCCTTGACGTTGTCGATCGTGTCGGAACTC
TCGACTTCGAGGGTGATGGTTTTGCCGGTCAAAGTTTTGACGAAGATCTGCATACCGCCACGAAGACGGAGGACCAGGTGGAGAGTCGACTCCTTCTGGA
TGTTGTAATCCGCCAAGGTACGGCCGTCTTCGAGCTGTTTGCCAGCGAAGATGAGCCTTTGCTGGTCGGGTGGGATCCCTTCCTTGTCTTGGATCTTGGC
CTTAACGTTGTCGATGGTGTCGGAACTCTCGACCTCGAGAGTTATGGTCTTGCCGGTCAGGGTTTTCACGAAGATCTGCATCTTCTAAAAGGCTATGAGA
ATAATCTGAGGAGATGATTTGAGAAAGATTTTGATTTGCTCTGTTTGGATGCGAGATAACACGGGTGGAGAGGGGAATTTATATAGGAGAAGGAGAGGAG
GTGACCGACTCGTATAGGTTTTCTTACTT