| Target | Query species | Target species | Query coverage (%) | Target coverage (%) | Identity | Alignment length (nt) | Orientation |
| CNT30513779 | Theobroma cacao | Juglans regia | 27.23 | 44.02 | 80.51 | 195 | forward |
| CNT30727223 | Theobroma cacao | Corchorus capsularis | 22.07 | 11.26 | 85.44 | 158 | forward |
| CNT30382128 | Theobroma cacao | Manihot esculenta | 11.31 | 20.77 | 88.89 | 81 | forward |
| CNT30503973 | Theobroma cacao | Nicotiana attenuata | 20.81 | 21.82 | 80.54 | 149 | forward |
| CNT30635699 | Theobroma cacao | Capsicum annuum | 38.41 | 12.43 | 79.27 | 275 | forward |
| CNT3093986 | Theobroma cacao | Solanum tuberosum | 39.8 | 16.45 | 79.3 | 285 | forward |
| CNT30509931 | Theobroma cacao | Solanum lycopersicum | 37.71 | 14.07 | 79.63 | 270 | forward |
| CNT30423726 | Theobroma cacao | Papaver somniferum | 25.84 | 13.57 | 81.08 | 185 | forward |
| CNT30570838 | Theobroma cacao | Vitis vinifera | 29.33 | 49.88 | 79.05 | 210 | forward |
| CNT30643380 | Theobroma cacao | Cannabis sativa | 17.46 | 26.54 | 84 | 125 | forward |
| CNT30113848 | Theobroma cacao | Ficus carica | 28.21 | 26.17 | 82.18 | 202 | forward |
| CNT3050792 | Theobroma cacao | Cucumis sativus | 23.74 | 17.03 | 81.76 | 170 | forward |
>CNT3031788
CAGAATTAAAAAGAAAACAGGAAAAAGGCAACATTGATCTGTTTTTCCTTTTATTTTTGGACGGGAATTGAAAGAGTTATCTAATTTACCAAAAAAGACA
AAAAAAAAAGAAAAGGAAAGGCAATCATAGAAATAGAGAAGAGCGAACACAAGTTCACATTTACAGCCTTAGGTTTCCATAAATATTGTCACACAAATAC
CAGGGCATGCAATTGCAAACATCCGCCATGATGATCATGATGATGATAATGATGAACAGAAAACAAGATCAACGGCCACAAATTTAACACAAATTACAAG
GGAAAAAAAGGGGAGAAAATAGAAAACTCAACAAATTAAATACACGGGAGAAAATCCGTTTTCATGTGACAGAGTTATTTAAACCCACTTAATAATCGGT
GGCGGGGAGTTGCTCGTGGGTGTGGCTAATGAAGAAAAACTCATAGACGAGCCCAGCGATCCCACCGCCGATAAGAGGTCCAGCTAACCAAGGCAGGTCC
AAACGAAACAGCTGGGTTCATTGAGGCTCCTTCGAAGGCCCCACCTGCCAAGATGTTGGCTCCCACGATTAAACCAATAGCCAATGGTGCGATCACTCCC
ACACTTCCCTTCTTAGGATCAACGGCTGTGGCGTAGACTGTGTAGACCAATCCGAATGTCATCACGATCTCGAAAACAAAGGCATTCCAGACCCCCACTC
CGGAGGATAATCCAAA