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Detailed information on CNT30317837


BLAST search results

BLAST vs Swiss-Prot:
sp|Q09X29|ATPI_MORIN, E-value = 6e-92

BLAST vs NONCODE:
NONATHT002192, E-value = 3e-71

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30696665Corylus avellanaOryza sativa42.597.9286.16448forward
CNT30703171Corylus avellanaQuercus lobata80.997.1589.55852forward
CNT30272039Corylus avellanaChenopodium quinoa15.7823.1587.95166forward
CNT3021394Corylus avellanaCitrullus lanatus34.2257.4294.44360forward
CNT30198909Corylus avellanaPisum sativum25.6711.9791.11270forward
CNT30486613Corylus avellanaOlea europaea7.1324.0489.3375forward
CNT30505351Corylus avellanaNicotiana attenuata46.8614.1888.44493forward
CNT30291829Corylus avellanaTriticum aestivum51.7113.884.74544forward
CNT30226738Corylus avellanaHordeum vulgare25.5720.6389.22269forward
CNT30541450Corylus avellanaBrassica napus47.4317.7586.17499forward
CNT30238613Corylus avellanaBrassica oleracea33.3767.6383.48351forward
CNT30511101Corylus avellanaSolanum lycopersicum46.8640.3885.19493forward
CNT30172770Corylus avellanaTrifolium pratense23.5748.6387.5248forward
CNT3017990Corylus avellanaZea mays42.5913.5486.61448forward
CNT30232563Corylus avellanaAnanas comosus53.9916.5886.8568forward
CNT3057337Corylus avellanaAmborella trichopoda46.7713.284.55492forward
CNT30726491Corylus avellanaLupinus angustifolius5246.9587.39547forward

Expression of CNT30317837

Peptides detected in this lncRNA

>peptide 1 (38 aa)
MASSFVGIEISATSGSQFVSIKQGHNLYQLNKLLEFPK*

>peptide 2 (34 aa)
MIFQGKRAPDQFETKINRNKIPIKETHGPYSSPI*

>peptide 3 (30 aa)
MSVGIICGLRTAIMDEPNKRAITTQEVIST*

>peptide 4 (38 aa)
MITDFINLWTSPNNLFILYLIINHLFRIARTTLTNCKY*

Sequence

>CNT30317837
TTCGTTCTTTTTTCTCTGACAGATGGTCAGAACGAAATAACCTAATCCTTTTTTGGTAAGACCCGCATAGAAATATGCTAATGATGTGAGTAAAGCTAAA
GCAACGGTAGTATTTATATCATTTGCAGGTGCGGCTAATTCCCCATGAGGTAACTGTATGATTTTCCAAGGTAAAAGAGCACCTGACCAATTCGAAACAA
AAATAAATAGAAACAAAATTCCAATAAAGGAAACCCATGGACCATATTCTTCTCCAATCTGAGTTTTGCTCACGTCTCGAATGAATTCAAGGACATATTC
GAAGAAATTCTGAATGTCAGTAGGAATCATTTGTGGATTACGAACAGCTATAATGGATGAACCTAATAAGAGAGCAATTACAACCCAAGAAGTAATAAGT
ACTTAGGCATGGACTTGAAAGCCTCCTATTTGCCAATAGAAATGTTGGCCAACTTCCACACTAGATATATCGTACAACCCTTTTAGTAGTGTGTTGATAG
AACATAATAGAACATTCATATTGCCCTCTAAAGGAAATAGAACTTCAAAAGAATTATTTTGATTCAACCATCTATTTTTCAACTTGCCTACTTGAATTAT
ATATTTTGTATATTAACTAATCACATAATAGCCCTATTAGTGTATCTCTTTTGTGCGATTAAGGAATGATAACCGATTTCATAAATCTATGGACTTCTCC
AAATAATTTATTTATCTTATATCTTATTATTAATCACTTATTTCGTATAGCAAGAACGACCCTCACAAATTGCAAATACTAATTTGTTAAGAATTAATCG
GATTGAAGCTATGGCGTCATCATTTGTTGGAATCGAAATATCTGCGACATCGGGGTCACAATTTGTATCGATTAAACAGGGTCACAATTTGTATCAATTA
AACAAATTGTTGGAATTCCCAAAATGATACATTCCTGAAAAGCCGTATATTCTTCTTGCTGATCAACGATTATTACAACATTACGTAACCCCGTCATATA
TTTAATCCCGCCCAAATATGTTTGCAAGTGAGATAATTGTCTCTTCAACATA