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Detailed information on CNT30317759


BLAST search results

BLAST vs Swiss-Prot:
sp|Q09FZ1|NU1C_PLAOC, E-value = 0.0

BLAST vs NONCODE:
NONMEST004538, E-value = 2e-83

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30671235Corylus avellanaSetaria viridis5.4929.0287.5112forward
CNT30531354Corylus avellanaEucalyptus grandis87.8467.1390.511791forward
CNT30518502Corylus avellanaJuglans regia12.2165.0196.79249forward
CNT30615574Corylus avellanaSesamum indicum73.17100.290.081492forward
CNT3020678Corylus avellanaCitrullus lanatus5.7930.5792.37118forward
CNT30406240Corylus avellanaBeta vulgaris12.710090.73259forward
CNT30201817Corylus avellanaPisum sativum30.1199.3590.72614forward
CNT30712407Corylus avellanaGlycine max55.9692.0287.821141forward
CNT30569544Corylus avellanaActinidia chinensis90.5349.9689.761846forward
CNT30589541Corylus avellanaMusa acuminata23.6960.386.13483forward
CNT30237694Corylus avellanaBrassica oleracea33.6962.7487.92687forward
CNT30659065Corylus avellanaTriticum dicoccoides9.0232.885.33184forward
CNT30262672Corylus avellanaBrassica rapa35.6110.1488.43726forward
CNT30608772Corylus avellanaGossypium raimondii15.399.3692.95312forward
CNT30215974Corylus avellanaHelianthus annuus32.4290.389.71661forward
CNT30624957Corylus avellanaDaucus carota38.995087.92795forward
CNT30689544Corylus avellanaTriticum urartu23.27.5786.05473forward
CNT30596717Corylus avellanaOryza meridionalis38.2183.7684.85779forward
CNT30360555Corylus avellanaLactuca sativa53.6599.9189.761094forward
CNT30151942Corylus avellanaPrunus persica89.8578.0690.991832forward
CNT3057989Corylus avellanaAmborella trichopoda21.638489.57441forward
CNT30327547Corylus avellanaAsparagus officinalis23.3415.1189.71476forward
CNT3035415Corylus avellanaCucumis melo32.1798.291.16656forward
CNT30148081Corylus avellanaBrachypodium distachyon44.2989.1483.39903forward
CNT30116024Corylus avellanaOryza nivara19.9690.8585.75407forward
CNT30723989Corylus avellanaLupinus angustifolius19.9629.291.15407forward

Expression of CNT30317759

Peptides detected in this lncRNA

>peptide 1 (37 aa)
MLELEELPKDRRIRVQYVVAALRIFLFLTIQLLVRLL*

>peptide 2 (33 aa)
MTAMDGPILNKRVSPLDGRRFSLKSSFVPYARA*

Sequence

>CNT30317759
GATTTTCAATCCAAATTAAAGCACAAACCAACTAATCAATAGTTGAAATTTGTAGTTAGTGACTAAACAAAATAAACAAAAGAAACGGCATTTATTTCGA
TCAAAACGGAAGCTTACTAATTGGAAATTACTCTTTATCTTTAATCAAAGGATTTACTTATATATCTTTTTTTTTATTTACTTATTTTTTTTTTAGGTGA
ATTTAAAATTGTTCGAATTGTATAATCGTCAATTACTGATATTGGTAAACGACCAAAGGCAATTTGATTATAATTCAATTCGTGACGATCATAAGTAGAA
AGCTCATATTCTTCAGTCATTGATAAACAATTTGTTGGACAATACTCAACACAGTTACCACAAAATATACAGATTCCGAAATCAATACTGTAATTAAGCA
ACCGTTTCTTTCGAATATTAGTTTCAAATTTCCAATCAACAACAGGTAAATCTATAGGGCATACACGAACACATACTTCACAAGCAATGCATTTATCAAA
CTCAAAATGTATTCGACCGCGGAAACGTTCTGATGTGATTAATTTTTCATAGGGATATTGAATCGTTACAGGTAAGCGATTTGCATGGGATAGGGTAATC
ATGAAACTTTGACCAATGTACCTTGCAGCTCGTACTGTTTGTTGACCATAATTCATGACCCCAGTTACCATAGGGAACAGATTGTAAATATCTATGAATA
TTTTTATGTTTGTTTCTTTCTCTTGTTTGAGACAAGCCACAAATTGAGAATATAGTATTCCTTTACAGTGAAAGAAGTTGGAAAGAAGTTGTTAATAATA
GATTACCAAGAGAAATAGGTAAAAGAAATTTCCATCCAAGATTTAATAGTTGGTCTATTCTTAGCCTAGGTAAAGTCCATCTTGTTGTGATAGAAATGAA
CAAGAACAAATAAGTTTTGGCTAATGTAATAAAGATACCAATTGTGGTTCCAAAGACCCAGCGTGTTTTATTTATTTCAAAAAGATCAGAAACGAATATG
TACGGAATAGAAATATTCCAACCGCCCAAGTAAAGAACTGTTACAAATAATGAAGAAACTAATAGGTTTAGATAGGAAGCAACATAAAATAAACCAAATT
TGATGCGCGAATATTCGGTTTGATAACCTGCTACTAATTCTTCTTCTGCTTCTGGTAAATCAAAAGGTAATCTCTCACATTCTGCTAGGGAAGAAATTAG
AAAAACGATAAACCCTATAGGTTAACGCCACAAATTCCATCCCCAAAAACCATATTTTGATTGAGCCTCAACTATATCAACTGTACTTAAACTGTTAGAT
AGTAGAGCTATTGATAATACACATAGGGTTAATGGTATTTCATAACTAATCGATTGAGCAGCAGCTCGTAGACCACCTAAAAAAGAATATTTATTATTTG
AACCATATCCTGACATAAGAAGTCCAATGGGAGCAATACTTGAAACCGCAATCCATAAAAAAACCCCGATATTGAGATCGGATAAAACAAGGCGATAGTC
AAAAGGAATTACTGAATAACTTAGTAGAATTGATATGACTGCTATGGATGGTCCGATACTGAATAAACGAGTATCTCCTCTAGATGGAAGAAGATTCTCT
TTGAAAAGTAGTTTTGTCCCATATGCTAGAGCTTGAAGAACTCCCAAAGGACCGGCGTATTCGGGTCCAATACGTTGTTGCAGCCCTGCGGATATTTCTC
TTTCTAACCATACAATTACTAGTACGCCTATTGTGATTCCCAATACAAGAGTCAAAATAGGAACAAGCACCCATATAATTCCATAGACCTCTTTTAAGGA
TTCCACTCTGTAAAAAGAATTGATATCTTGTATTTCCGTTGTATCAATTATCATTTCAACGATCAACTTCTCCCATAATGATATCTATGCTACCTAGTAT
TGTCATAATATCAGCCAATTTCATTCTTTTAACTAACTGAGGAAGAATTTGCAAATTGATAAAACCCGGCGGGCGAATTTTACATCTCCAAGGAAAACCA
CTCTGATCCCCTATCAGAAAAATTCCCGTCTCTCTCTTT