Detailed information on CNT30317463


BLAST search results

BLAST vs Swiss-Prot:
sp|P11139|TBA1_ARATH, E-value = 1e-14

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30493173Corylus avellanaOlea europaea22.5515.0187.162forward
CNT30709004Corylus avellanaGlycine max22.5523.0588.7162forward
CNT3099067Corylus avellanaSolanum tuberosum25.095.0491.369reverse complement
CNT30624589Corylus avellanaDaucus carota24.7313.7188.2468forward
CNT30619808Corylus avellanaCajanus cajan2411.0989.3966forward
CNT3040646Corylus avellanaMarchantia polymorpha25.0922.2691.369forward

Expression of CNT30317463

Peptides detected in this lncRNA

>peptide 1 (40 aa)
GKVVGSVFLAADELLRVEKLTVCSGPHFINDSGSQQALPT*

>peptide 2 (61 aa)
MTVVPSRHCRPEYRPDRCGSKCTLSFSQRLRRVEEERNSRTRRMKKEGKMYCRRVSRRLSNC

Sequence

>CNT30317463
TGGCAAAGTTGTTGGCAGCGTCTTCCTTGCCGCTGATGAGTTGCTCCGGGTGGAAAAGCTGACGGTATGCTCCGGTCCTCACTTCATCAATGACAGTGGT
TCCCAGCAGGCATTGCCGACCTGAATACCGGCCTGACCGATGTGGATCGAAATGCACTCTCTCATTTTCTCAGAGATTACGAAGGGTAGAAGAAGAGCGA
AATTCTAGAACAAGAAGAATGAAGAAAGAAGGGAAAATGTATTGTCGGCGTGTATCAAGACGCCTTTCAAATTGT