Detailed information on CNT30317114


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9C821|PEK15_ARATH, E-value = 1e-44

BLAST vs NONCODE:
NONSTUT002097, E-value = 6e-13

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30379990Corylus avellanaManihot esculenta18.436.3983.67147forward
CNT3099214Corylus avellanaSolanum tuberosum18.7735.0581.33150forward
CNT30654896Corylus avellanaRosa chinensis8.7621.1587.1470forward
CNT30704506Corylus avellanaPrunus avium22.0338.8582.95176forward

Expression of CNT30317114

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MRCSANASHFVDKFFSVTFRRTQGFHCDQTPIR*

>peptide 2 (36 aa)
MLATSLINSSPLPLDALKVFTATKRPSGSFPLYTTP*

>peptide 3 (76 aa)
MKPTVPLMPFIDIILSFVLHSLARPKSEIFGHKSSSKSILCGFMSKCRILVLQPRCKYSSPRAMPTAIWNIVLLSK*

>peptide 4 (66 aa)
LFYYVSKSTRIITLFKLHINPVWKICLAGMRESIIKIFSSSNHFKNQHSEAVNVRLMRDSTKVSTK*

>peptide 5 (64 aa)
LLLCLQKYQNYYIVQASYKSSVENMSRWYERIHHQNFFFLQPFQEPTFRSCKRQTYERLHQSFD*

Sequence

>CNT30317114
CTCTTCTATTATGTCTCCAAAAGTACCAGAATTATTACATTGTTCAAGCTTCATATAAATCCAGTGTGGAAAATATGTCTCGCTGGTATGAGAGAATCCA
TCATCAAAATTTTTTCTTCCTCCAACCATTTCAAGAACCAACATTCCGAAGCTGTAAACGTCAGACTTATGAGAGACTCCACCAAAGTTTCGACTAAATA
GTTCTGGTGCAATGAAACCTACAGTTCCTCTCATGCCGTTCATTGATATAATACTCTCTTTTGTTTTGCATAGTTTAGCAAGGCCAAAATCAGAGATTTT
TGGGCACAAATCTTCATCCAAAAGTATATTGTGTGGTTTTATGTCAAAATGTAGGATCCTTGTGTTACAACCACGGTGCAAGTATTCTAGTCCTCGAGCA
ATGCCAACTGCAATTTGGAACATAGTCTTGCTGTCCAAGTGACAATTTGTAACTGGAGATCCTTTATTATATATAAACTTATCAAGAGATCCATTAGGCA
TAAATTCATAGATTAGAGCTCTTTTAGTCCTCTCGTAGCAGAAACCTAAAAGATTGACCATATTAACATGCGATGTTCTGCTAATGCTAGCCACTTCGTT
GATAAATTCTTCTCCGTTACCTTTAGACGCACTCAAGGTTTTCACTGCGACCAAACGCCCATCAGGTAGCTTCCCTTTGTATACAACACCATAACCTCCT
TGTCCTACTTTATCTTTGAATGAGTTGGTCAATTTCTTCACATCTGAATATGTATATCTCTTTGGGGCTATTGATCCGCAGTTCTTCATGATTTCCTCA