Detailed information on CNT30317080


BLAST search results

BLAST vs Swiss-Prot:
sp|P29684|RBS_HEVBR, E-value = 2e-20

BLAST vs NONCODE:
NONPOPT001479, E-value = 2e-14

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30501576Corylus avellanaCoffea canephora12.620.5293.6247forward
CNT30508755Corylus avellanaSolanum lycopersicum20.1128.28475forward
CNT30153087Corylus avellanaPrunus persica26.5442.4984.8599forward
CNT3030395Corylus avellanaTheobroma cacao30.2945.285.84113forward

Expression of CNT30317080

Peptides detected in this lncRNA

>peptide 1 (48 aa)
MKSLKMPSMFLSFLQLSSKFLARAENLLLQLRIYKGGRLGISYPVVRD*

>peptide 2 (56 aa)
LQLELQARNQTLAKKVVYFLGQLLGVKWWKVMSLVFWVTGKAEVDLRPVKGATMLA*

Sequence

>CNT30317080
CTCCAACTCGAACTCCAAGCAAGGAATCAAACCCTTGCGAAGAAGGTAGTCTACTTCCTTGGCCAGCTGCTCGGAGTTAAGTGGTGGAAGGTAATGTCGT
TGGTCTTCTGGGTAACCGGGAAAGCTGAGGTGGACTTGAGGCCGGTGAAGGGTGCAACCATGCTGGCTTGAGCCGGGGTGGCACGGTTGACGGCGGCAAC
GGTGGCCGATGAAATCATTGAAGATGCCATCGATGTTTCTTTCTTTCTTACAACTCTCCTCAAAATTCCTTGCTAGAGCTGAAAACCTCCTTCTCCAACT
TCGTATATATAAAGGTGGAAGACTGGGTATTTCGTATCCTGTGGTCAGAGATTGATGGGCTTGATCTCAAACA