Detailed information on CNT30317005


BLAST search results

BLAST vs Swiss-Prot:
sp|P10707|CB2D_SOLLC, E-value = 3e-12

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30524453Corylus avellanaSetaria italica54.6420.9981.05153forward
CNT30380061Corylus avellanaManihot esculenta3525.9985.7198forward
CNT30630708Corylus avellanaVigna unguiculata36.4339.6989.22102forward
CNT30503251Corylus avellanaNicotiana attenuata21.797.0191.861forward
CNT30712704Corylus avellanaGlycine max37.1428.5790.38104forward
CNT30544306Corylus avellanaBrassica napus26.0720.9284.9373forward
CNT30479805Corylus avellanaArabidopsis halleri28.5726.328580forward
CNT30322408Corylus avellanaAsparagus officinalis36.0711.6283.17101forward

Expression of CNT30317005

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MELAREENSKKKKKKITELELFPQFQQSQ*

Sequence

>CNT30317005
CGACCAACATTAATTTACAATGCATCTAAGCTTCTGCGTGCATGGAGCTAGCAAGAGAGGAAAACTCTAAAAAAAAAAAAAAAAAAATCACAGAGTTGGA
GCTCTTTCCGCAGTTCCAGCAATCACAGTGAGCAAGTTGTTGCCAAAGGGATCGCTGAGATGTTTTGCAAGCCTACCATTCTTAATCTCCTTCACCTTTA
GAATTGCAGCCTGGTCCGGGTCATTTGCAAGCCCCAATGGATCAAATGGACCACCTGGGTGAAGCTTGTCCTCCAAGTCC