Detailed information on CNT30316771


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30692619Corylus avellanaOryza sativa38.4374.5886.36176forward
CNT30530261Corylus avellanaEucalyptus grandis43.6776.6389.5200forward
CNT30699837Corylus avellanaQuercus lobata24.2447.2381.98111forward
CNT30372449Corylus avellanaArabidopsis thaliana27.9545.2382.03128forward
CNT30127153Corylus avellanaCorymbia citriodora39.5266.5490.06181forward
CNT30479822Corylus avellanaArabidopsis halleri30.5733.984.29140forward
CNT30704146Corylus avellanaPrunus avium42.1427.1888.6193forward
CNT3022423Corylus avellanaPopulus trichocarpa41.718.5882.2191forward
CNT30331317Corylus avellanaDioscorea rotundata31.8844.9289.73146forward
CNT30558432Corylus avellanaPanicum hallii34.0653.6185.26156forward

Expression of CNT30316771

Peptides detected in this lncRNA

>peptide 1 (89 aa)
LSEKDFVGEGAVEVGGVEEGDAGVDGVVDESDHVFFGLGRAIEGGHAHATQALRRHLQSLRTQLYPPHSYGRHFFLFSFLQAIPEAAEA*

Sequence

>CNT30316771
CTTTCCGAGAAGGATTTCGTTGGTGAAGGGGCCGTAGAAGTCGGAGGTGTCGAGGAAGGTGACGCCGGAGTGGACGGCGTGGTGGATGAGAGCGATCATG
TCTTCTTCGGGCTTGGGAGGGCCATAGAAGGCGGACATGCCCATGCAACCCAGGCCCTGCGCCGACACCTCCAGTCCCTGAGAACCCAGCTTTATCCTCC
CCACTCTTACGGCCGCCATTTCTTTCTTTTCTCCTTTCTACAAGCAATACCAGAAGCAGCTGAAGCCTGACACCCAGTCCCTGAGAACCCAGCTTTATCC
TCCCCACTCTTACGGCCGCCATTTCTTTCTTTTCTCCTTTCTACAAGCAATACCAGAAGCAGCTGAAGCCTGACACCCAGGTTGAGCGATTAAAATGGCT
GCTGCGAAAGGTTTAAGAGTGAGTGGTAGGTGACGGACGAAGGATTGAAAAGTAAAAT