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Detailed information on CNT30316655


BLAST search results

BLAST vs Swiss-Prot:
sp|P69310|UBIQ_AVESA, E-value = 6e-43

BLAST vs NONCODE:
NONSTUT000620, E-value = 7e-20

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30674447Corylus avellanaSetaria viridis65.430.9391.75206forward
CNT30530180Corylus avellanaEucalyptus grandis64.4438.5293.6203forward
CNT30545885Corylus avellanaIpomoea triloba86.9860.3590.51274forward
CNT30518728Corylus avellanaJuglans regia79.0542.5690.36249forward
CNT30617700Corylus avellanaSesamum indicum79.6810.9488.05251forward
CNT30728895Corylus avellanaCorchorus capsularis78.4134.0790.28247forward
CNT30628786Corylus avellanaVigna unguiculata79.6851.2292.43251forward
CNT30283510Corylus avellanaTriticum aestivum78.4134.3593.93247forward
CNT30220676Corylus avellanaHordeum vulgare79.6844.5893.63251forward
CNT30586129Corylus avellanaMusa acuminata69.2140.9890.83218forward
CNT30435195Corylus avellanaAegilops tauschii79.6843.3593.23251forward
CNT30241699Corylus avellanaAvena sativa78.4124.1493.12247forward
CNT30655772Corylus avellanaTriticum dicoccoides78.4130.2793.93247forward
CNT30456592Corylus avellanaSaccharum spontaneum78.4130.0590.69247forward
CNT30130551Corylus avellanaLolium perenne78.4136.2793.12247forward
CNT3067544Corylus avellanaLeersia perrieri78.4115.0293.12247forward
CNT30623440Corylus avellanaDaucus carota79.6812.6188.84251forward
CNT30720110Corylus avellanaTriticum spelta80.3240.0393.68253forward
CNT30341903Corylus avellanaEragrostis tef78.4129.2793.93247forward
CNT30368046Corylus avellanaSorghum bicolor78.4140.4995.14247forward
CNT30356771Corylus avellanaLactuca sativa79.6823.289.64251forward
CNT30369422Corylus avellanaOryza glumipatula78.4118.8892.31247forward
CNT30571087Corylus avellanaVitis vinifera67.6232.1390.61213forward
CNT30326410Corylus avellanaAsparagus officinalis78.4120.689.07247forward
CNT30576569Corylus avellanaOryza barthii78.4120.4192.31247forward
CNT30582668Corylus avellanaEchinochloa crusgalli69.2137.5994.04218forward
CNT30499448Corylus avellanaDigitaria exilis78.4132.7293.52247forward
CNT30116662Corylus avellanaOryza nivara78.4110.9392.31247forward
CNT30594254Corylus avellanaEragrostis curvula78.4129.7993.93247forward
CNT30725880Corylus avellanaLupinus angustifolius84.7639.3889.89267forward

Expression of CNT30316655

Peptides detected in this lncRNA

>peptide 1 (41 aa)
MRRCWSGGMPSLSWIFAFTLSIVSEDSTSRVMVFPVRVFTKI

Sequence

>CNT30316655
ATCCATAGCAAATCTAAAAAAATAAAGCAGAATTAACCTAATCACCGCCAGCCTTCTGGTAAACGTAGGTCTTCTTCTTGCGCTTTTTGGCGCCACCGCG
GAGGCGGAGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGACCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGC
TGGTCCGGCGGGATGCCCTCCTTGTCCTGGATCTTTGCCTTCACGTTGTCGATCGTGTCCGAGGACTCAACCTCTAGGGTTATGGTCTTCCCCGTTAGGG
TTTTCACGAAGATCT