Detailed information on CNT30316649


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONBNAT001751, E-value = 8e-100

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30721805Corylus avellanaTriticum spelta59.6514.1387.75204forward
CNT3052962Corylus avellanaAmborella trichopoda51.4621.6585.8176forward

Expression of CNT30316649

Peptides detected in this lncRNA

>peptide 1 (35 aa)
NHTRLDDTGLNTTNWNSSNTTNLVNILKRETERLV*

>peptide 2 (29 aa)
MGFCQGCNQPSSGRKKLPSQFHHTSPWSI*

Sequence

>CNT30316649
AACCATACCAGGCTTGATGACACCGGTCTCAACACGACCAACTGGAACAGTTCCAATACCACCAATCTTGTAAACATCCTGAAGAGGGAGACGGAGAGGC
TTGTCTGAGGGGCCTCTTGGGTTCAGAGATCAGGTCAAGAGCATCAAGGAGAGTTGGGCCCTTGTACCAGTCAAGGTTGGTTGACCTCTCAATCATGTTG
TCACCCTCGAAACCAGAGATAGGAACAAATGGGATTTTGTCAGGGTTGTAACCAACCTTCTTCAGGTAGGAAGAAACTTCCTTCACAATTTCATCATACC
TCGCCTTGGAGTATTTAGGGGTAGTTGCATCCATCTACAAAG