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Detailed information on CNT30316626


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30639490Corylus avellanaNymphaea colorata24.2718.6583.87124forward
CNT30703861Corylus avellanaQuercus lobata47.7595.3190.57244forward
CNT3070513Corylus avellanaQuercus suber66.3449.7887.61339forward
CNT30586652Corylus avellanaMusa acuminata44.0325.281.33225forward
CNT30543366Corylus avellanaBrassica napus22.3125.1784.21114forward
CNT30133477Corylus avellanaLolium perenne15.0738.1288.3177forward
CNT30129081Corylus avellanaCorymbia citriodora28.9628.4679.73148forward
CNT30370023Corylus avellanaOryza glumipatula15.0731.5684.4277forward
CNT30151848Corylus avellanaPrunus persica62.8240.6882.24321forward
CNT3022456Corylus avellanaPopulus trichocarpa45.2133.1981.39231forward
CNT30120862Corylus avellanaCitrus clementina44.4241.7385.46227forward
CNT30101518Corylus avellanaOryza rufipogon15.0731.8285.7177forward
CNT30114984Corylus avellanaEutrema salsugineum23.8742.3685.25122forward

Expression of CNT30316626

Peptides detected in this lncRNA

>peptide 1 (33 aa)
SIRIQIIETHNKKPMFMQFFMKKVVEFQNPSKS*

>peptide 2 (54 aa)
MSFEYLSPLTASSEANDSSSTISSGVSFTDKALIFSLKFSILVVPGIGHTSSPW*

>peptide 3 (30 aa)
MILLCSRFSGWNLGMNCKQQIIHTSTEVGS*

Sequence

>CNT30316626
CGTCTATAAGGATTCAAATTATTGAGACACACAACAAAAAGCCTATGTTTATGCAATTTTTCATGAAGAAAGTGGTGGAGTTTCAGAATCCTTCCAAGTC
TTAATGTCATTCGAATACCTATCACCCTTAACAGCATCCTCTGAAGCAAATGATTCGAGTTCAACCATTTCTTCTGGTGTGAGTTTCACAGATAAAGCTC
TAATATTCTCGTTGAAGTTTTCAATCTTGGTGGTTCCTGGAATTGGACACACGTCATCCCCTTGGTGATGAACCCAAGCCAATGCTAGTTGTGATGGGGT
GCATCCCTTTCTCGTTGCCATTTCATTAACACGCTCAAATATGATTTTGTTGTGCTCTAGATTTTCAGGTTGGAACCTAGGTATGAACTGCAAGCAGCAA
ATAATACATACATCAACTGAGGTAGGTTCATAGTGAGTGTAATTTTGGCGTCCCTTTCATTATTCGAGAATGTCAATATAATGTATTACGAGAAATGCTA
CACATATTTTC