Detailed information on CNT30316599


BLAST search results

BLAST vs Swiss-Prot:
sp|P23666|GUN2_PERAE, E-value = 1e-28

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30381644Corylus avellanaManihot esculenta82.394588.03234forward
CNT30538870Corylus avellanaBrassica napus47.8930.781.62136forward
CNT30613838Corylus avellanaArabis alpina42.6133.9985.12121forward
CNT30609427Corylus avellanaGossypium raimondii88.0339.6285.6250forward
CNT30654406Corylus avellanaRosa chinensis55.2831.0981.53157forward
CNT30362142Corylus avellanaSorghum bicolor36.6217.7884.62104forward
CNT30596016Corylus avellanaOryza meridionalis34.5114.4886.7398forward
CNT30151985Corylus avellanaPrunus persica44.7236.1885.04127forward
CNT3031918Corylus avellanaTheobroma cacao44.0147.3588125forward
CNT3056501Corylus avellanaAmborella trichopoda63.7310.4880.66181forward
CNT3022907Corylus avellanaPopulus trichocarpa35.5625.3191.09101forward

Expression of CNT30316599

Peptides detected in this lncRNA

>peptide 1 (45 aa)
QHSISWFPRCRSWLRVIVVCTNIMETIMLVRASNHSSNKCIWVWL*

>peptide 2 (35 aa)
PTQHLMVSKVPELAPCNCSLYEHHGNHHACQGQQP*

Sequence

>CNT30316599
ACCAACACAGCATCTCATGGTTTCCAAGGTGCCGGAGTTGGCTCCGTGTAATTGTAGTTTGTACGAACATCATGGAAACCATCATGCTTGTCAGGGCCAG
CAACCATAGCTCCAACAAGTGTATTTGGGTTTGGCTTTGAACTGTCCCTCCATTTCCATCCTCCTTTACAGTTATACTTGATCTTATTCTTAGGGATAGA
TGCGCCTCTATGGTGGGTGTGTCTTGGGTAATGATTACCAAAACCAACGATGTAGCTCATCTTCCGAGGATTCTTGCCGAGGAT