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Detailed information on CNT30316508


BLAST search results

BLAST vs Swiss-Prot:
sp|O80341|EF102_ARATH, E-value = 3e-46

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30101508Corylus avellanaOryza rufipogon3.9224.1487.363forward
CNT30113680Corylus avellanaFicus carica1221.3380.31193forward

Expression of CNT30316508

Peptides detected in this lncRNA

>peptide 1 (76 aa)
MRVEEAVETYIYRERDEEFEFHFRMSKRRKDLVSHHLRRCKQETSSRRKLFFRGSNAYVYKCFMIIITLRLSLLEL*

>peptide 2 (39 aa)
MGLGLPWKSRSSKLGNRQSRTGIETQNYPLERPHRASEA*

>peptide 3 (48 aa)
MRNLNFISECQKEEKTWFHTTFDVASRKHRLEGNFSFVDLMRTCTNVL*

>peptide 4 (31 aa)
TSSLFFFFFFIRNFSDVIMHKENRLYVKNKK*

Sequence

>CNT30316508
TACTTCTTCTTTGTTTTTTTTTTTTTTTTTCATTCGAAACTTTTCTGATGTAATAATGCACAAAGAGAATCGATTATATGTGAAAAATAAAAAATAAAGG
AATTTGATAACATATCCACCAGAAATCAAAACAATCATACAACCATAAGCTGTGTAAATCCTAACGGCGGGTGAGGGGACAACGGAGACAACGGAGGAAC
GCTGAAAACGCCTTTAACATCACACTCCCACACCGACGTCCAACTCGACGGCGTCAACGGTATATCCCTCGTACAACTAGAACTAGCCGTGTTTTGGGAG
GACGCCGTCGACCTCTCCTTCTTCACCACCACCGTCTCCTTCGCTGCTTCCTCCTCCTCACGACGCCGTTTTCTCTCGCCAGACGTGGCCTTCGTTTCTA
ACTTCCCGGCTTCGAGTGGGAAGTTGAGGATGGCTTTTGAGCCGCGGAGCTTGAACGCGGCTCTGTCGTAGGCCTTGGCGGCATCGATAGCCGTGTCGAA
GGTCCCCAGCCACACGCGCGAGCCGCGACGGTTGGGGTCTCGGATCTCCGCCGCGTACTTGCCCCACGGCCTTTGTCGGACCCCTCTGTAGTGCTTTTTC
ACTTCAACACTTGGGTTTTCGTGTACGGGCAGCGACGGTTCGGGTTGGGCATTCGGGTTCCCAAATTGGATCCACTCTGTGTTGCTTTTGGCCGGGAGCG
AGATCTTCAGCGCCGGTTTCCGATTCGTTGGAGACCCCGACTCGAATTCGAAGGAACAACTGCTGTTGGGTTGGGTTTGGGAAGCTCTGAGATCCACCAA
CGAAGATTTCGCTTCAGATTCGAAGCACCCGTCGGTCGATTGCGAGGTTGAGGTGAGGGATTTGGGCGTAGTGAGGTCGATTATTTCTGGGTTTGCTTGG
AATTGGAAGAAATCAGCGTCGAAGGTGAAGTCGAAGAAGTCGTCGGAGCTGAATGGGTCTGGGATTGCCATGGAAGAGCCGGAGCTCGAAGCTTGGGAAC
CGACAGAGTCGGACAGGGATTGAGACACAAAACTACCCACTGGAGAGGCCTCACCGAGCAAGTGAAGCTTAATAAGCTCCAATGCGGAGGAAACTCCTTC
GAATGGGGTCGCCATGGATAACAACAGAGCGTCAAAAATCAGAATAGCTATGAAAATGTTGCGGAAGCACAAGAGAAGAGAAGGAAGAAGGTTTTGAATT
TGTGAAAGGATGAGAGTGGAAGAGGCAGTGGAAACATATATATATAGAGAGAGAGATGAGGAATTTGAATTTCATTTCAGAATGTCAAAAAGAAGAAAAG
ACTTGGTTTCACACCACCTTCGACGTTGCAAGCAGGAAACATCGTCTAGAAGGAAACTTTTCTTTCGTGGATCTAATGCGTACGTGTACAAATGTTTTAT
GATTATTATCACCCTCCGATTGTCTTTGTTGGAACTTTGAAGTCAAATTTTAGCATCATCGACGGCTGATATTGGAGCATCTGTTCTTTCTTCTTGTTTC
TATTTGAAGCTTGCTTGTTCATTTGCTTTGGGGGATGGTTCTGAAAACTGCATGTGGGGAACGAAATAAAATAATAAAAAATAATAATTAAATAATGAGA
AAAGTAGAG