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Detailed information on CNT30316435


BLAST search results

BLAST vs Swiss-Prot:
sp|P69309|UBIQP_AVEFA, E-value = 2e-178

BLAST vs NONCODE:
NONMEST001181, E-value = 1e-137

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30701438Corylus avellanaQuercus lobata10052.589.56766forward
CNT30378432Corylus avellanaArabidopsis thaliana72.9872.0483.9559forward
CNT30615929Corylus avellanaSesamum indicum98.1722.4881.78752forward
CNT3020367Corylus avellanaCitrullus lanatus97.1366.2582.53744forward
CNT30727227Corylus avellanaCorchorus capsularis73.2448.8385.56561forward
CNT3069548Corylus avellanaQuercus suber66.4571.6991.36509forward
CNT30379509Corylus avellanaManihot esculenta96.0855.2684.65736forward
CNT30525132Corylus avellanaPhaseolus vulgaris99.7447.9683.38764forward
CNT30629380Corylus avellanaVigna unguiculata97.7864.1383.85749forward
CNT30156148Corylus avellanaPistacia vera80.9467.6185.48620forward
CNT3096981Corylus avellanaSolanum tuberosum97.7866.784.11749forward
CNT3088525Corylus avellanaVigna radiata96.2150.7282.36737forward
CNT30172216Corylus avellanaTrifolium pratense98.4344.2583.42754forward
CNT30145430Corylus avellanaMedicago truncatula94.2641.1283.1722forward
CNT3061706Corylus avellanaArabidopsis lyrata82.7769.2183.6634forward
CNT30609009Corylus avellanaGossypium raimondii94.2675.6882.41722forward
CNT30713920Corylus avellanaMalus domestica golden69.5898.1684.99533forward
CNT30623426Corylus avellanaDaucus carota95.0440.485.71728forward
CNT30153909Corylus avellanaPrunus persica76.2470.9683.56584forward
CNT30418468Corylus avellanaPapaver somniferum9761.7184.66743forward
CNT30642231Corylus avellanaCannabis sativa96.6169.8182.57740forward
CNT3024139Corylus avellanaPopulus trichocarpa97.7869.7483.58749forward
CNT30120117Corylus avellanaCitrus clementina87.698.8283.76671forward

Expression of CNT30316435

Peptides detected in this lncRNA

>peptide 1 (57 aa)
WSGGMPSLSCIFALTLSIVSELSTSKVMVFPVKVFTKICIPPRNRSTKCRVDSFWML*

>peptide 2 (59 aa)
VRWDALFVLYLRLDIVNSIRTFNLQGYGFSCQSLHKNLHSTTQPKHQVQGRLLLDVVIG*

>peptide 3 (40 aa)
MVSELSTSKVMVFPVKVFTKICIPPRRRRTKWRVDSFWML*

Sequence

>CNT30316435
TGGTCCGGTGGGATGCCCTCTTTGTCTTGTATCTTCGCCTTGACATTGTCAATAGTATCCGAACTTTCAACCTCCAAGGTTATGGTTTTTCCTGTCAAAG
TCTTCACAAAAATCTGCATTCCACCACGCAACCGAAGCACCAAGTGCAGGGTCGACTCCTTTTGGATGTTGTAATCGGCTAAGGTCCTTCCATCTTCCAA
CTGCTTACCAGCAAAAATCAACCTCTGCTGGTCTGGGGGGATACCCTCTTTGTCTTGAATCTTAGCCTTAACATTGTCAATGGTATCAGAACTCTCAACC
TCCAAAGTAATGGTTTTTCCGGTCAAGGTCTTCACAAAAATTTGCATTCCACCTCGGAGACGGAGGACCAAGTGGAGGGTGGATTCCTTTTGGATGTTGT
AATCCGCAAGGGTCCGACCATCTTCGAGCTGCTTACCAGCAAAGATCAACCTCTGCTGGTCTGGTGGGATACCCTCCTTATCTTGGATCTTTGCCTTGAC
ATTATCGATAGTATCAGAGCTCTCAACTTCCAAAGTGATAGTTTTGCCAGTCAAGGTCTTCACAAAAATTTGCATTCCACCTCGGAGACGGAGCACCAAG
TGGAGGGTGGATTCCTTTTGGATGTTGTAATCCGCAAGAGTCCGACCGTCTTCAAGCTGCTTACCAGCAAAGATCAACCTCTGCTGGTCTGGTGGGATAC
CCTCCTTATCCTGGATCTTGGCCTTGACATTATCGATGGTGTCCGAGCTCTCGACTTCCAAGGTTA