Detailed information on CNT30316392


BLAST search results

BLAST vs Swiss-Prot:
sp|P93604|LRK10_WHEAT, E-value = 7e-122

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30701990Corylus avellanaQuercus lobata27.7398.2983.1574forward
CNT30710978Corylus avellanaGlycine max6.2347.2581.4129forward

Expression of CNT30316392

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MTNGERRIAPYLLKLKQNSLVKFEKIDFKETK*

>peptide 2 (38 aa)
MSKFHLNPLQHPSWGSLLMIRKAWKAFVSFQLLLQAFL*

>peptide 3 (80 aa)
MHSHSFFYPPFPSITFQNYKHQLCMKCLQCFCRITQEPCILTSLLQQSKRQCYHLLDIALPSQSQKPWEQNSHQEECCEA*

>peptide 4 (46 aa)
MVNLSNSCNFIDKILSISFGPTQHLYSYESATSKCSFKYSAITSFA*

>peptide 5 (78 aa)
MGLSIDDKKGLEGICKLSTSSSSISMTLFIEGRLLGFICIHHKATMVIFLTIFFSSLVTSSISMSFLSCNWSYTQVGK*

Sequence

>CNT30316392
CGTTAAACATTTAACCAATATTGTTTAAACATTCTGTACTTCCAAAACTTTGAAAACACAGCTGCTCGATTAGCTTGTTCTCTTCAACGTTTAAAACAAA
AACTTACGAAGTGTGATATGCCAAATTTACAAAGCATGGGATGACTAATGGAGAACGAAGAATCGCACCATACCTTCTCAAACTGAAACAAAATTCATTG
GTTAAATTTGAGAAAATAGACTTCAAAGAAACGAAATGATGTAATAAGGCAAATTATCTTAAATCAAAGGAACTGATCTTATTTACTACACAGAAACATC
GAGCATCTTTGTGCTATCAGATATAGATGAGAACACTAATTGCCCCCATTTAATGGGAATGTAATTGAGGAGACTCATATCAATTAATTTGCATTTGAGA
GTGAGTTGTTTGACTTGATTCTTCTGATTGAATTGATGAGCAAGTTTCATTTGAATCCTCTCCAGCATCCCTCATGGGGCTCTCTATTGATGATAAGAAA
GGCTTGGAAGGCATTTGTAAGCTTTCAACTTCTTCTTCAAGCATTTCTATGACCCTATTCATTGAAGGGCGATTACTAGGCTTCATCTGTATACACCATA
AGGCAACCATGGTCATCTTCTTAACTATTTTCTTTTCCTCTTTGGTAACATCTTCCATTTCTATGTCCTTTCTGTCGTGCAATTGGTCATACACCCAAGT
AGGAAAATAAATTTGGCTTGAATGGTCTGCAAATGCATTCACATTCCTTCTTCTACCCGCCATTTCCATCAATAACATTCCAAAACTATAAACATCAGCT
TTGTATGAAATGCCTCCAATGTTTTTGTAGAATAACTCAGGAGCCATGTATCCTAACGTCCCTCTTGCAGCAGTCAAAGAGACAATGCTATCATCTACTT
GATATAGCTTTGCCAAGCCAAAGTCAGAAACCTTGGGAGCAAAATTCTCATCAAGAAGAATGTTGTGAGGCTTGATATCAAAGTGCAAAATCTGCATGGC
ACATCCTTGATGTAGATATTCAATTCCATGAGCCACTCCTAGAGCTATATTAAACATTTGGTCATAGCTTAGGAAGGTACTTTCTTCTGAGGGAAATACG
TATTTATTCAGGGAGCCATTAGGCATGAACTCATATACTAGAGCACGCTTTGATCCTTCAACACAAAAACCAATGAGTTGCACTACATTAACATGGTGAA
TCTTTCCAATAGTTGCAACTTCATTGATAAAATCTTGTCCATTAGTTTTGGACCTACCCAACATCTTTATAGCTACGAGTCGGCCACTTCGAAGTGTTCC
TTTAAATACAGTGCCATAACCTCCTTCGCCTAGTTTGTCCTTGAAATTTTTGGTCATCTTCCTAATTTCAAAATAAGAGTACCTTATTGGCATGAGGTTA
TTGTGACTTTGCAAGAATTCTTCAACAGCATCATACATCGATAAATGCCTTCTACGCCATTTATATATCAAAAACGTAATCACGCAGGGAATCAACAATA
CAACTCTTGCTGCAAGGTATAGTCCTATGAAAGAACATTGTCAAAATAAATTATAAGAAAACAAAATGTAGATGACCTACTGTCAGCATCTTATTTATTT
CATCTCAACCTGCTGCCTTTCTAAATCCTCGTATAATTAATCACAAATTTTGTTTTCTTTTTCATGTGAATAATATTTTCATCTTGCCTTCATTTCAAAA
TATTTCGTGTTTCACAGTCGAACGAATTATCCGCTAATTAAGTAAAAAGGGGAAAAAAAATTTAAAGAAGATGAAAGGTTCTTACTGTTAGAGATAAAGA
CGATATTAGAGAAGACCACTTCAAAGATAAGCCACAAGAGGAATCAAGATCAAGAAGGAGATAATGTTTTCTTCTATATTATCTCCTCATATATTTATCT
CTTTATTTATCTTATATCCTAAGAGATAACATTGTACTCTAAGCAGGACTCTAGTATCATATTCAAATTCTCTTGTAAAGATTATATAGAATTCAAACTG
TACATTACTCTATATAATAAACGTGATATTGTGCTGTTTAGGTATTCAAGCCTAAAGCACTTTCAATATA