Detailed information on CNT30316325


BLAST search results

BLAST vs Swiss-Prot:
sp|P93604|LRK10_WHEAT, E-value = 7e-129

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30534032Corylus avellanaEucalyptus grandis4.8335.5783.3390forward
CNT30515782Corylus avellanaJuglans regia55.6681.4681.391037forward
CNT3085819Corylus avellanaVigna radiata16.4323.3479.74306forward

Expression of CNT30316325

Peptides detected in this lncRNA

>peptide 1 (78 aa)
MGLSIDDKKGLEGICKLSTSSSSISMTLFIEGRLLGFICIHHKATMVIFLTIFFSSSVTSSISMSFPSCNCSYTQVGK*

>peptide 2 (56 aa)
MKCLQCFCRTTQEPCILTSLLQQSKRQCYHLLNIALPSQSQTPSDPNSHQEECCEA*

>peptide 3 (54 aa)
MRLLWLCKNSSTALYIDKCLLRHLYIKNAITHGVNNTAFAARYGPMKEHRQNKL*

>peptide 4 (46 aa)
MVNPSDGCNFIDKILSISFRLTQHLYSYESATSKCSFKYSAIASFA*

>peptide 5 (40 aa)
MYPNVPLAAVKETMLSSTEYSFAKPKSDTFGSKFSSRRML*

>peptide 6 (38 aa)
MSKFDLNPLQHPSWGSLLMIRKAWKAFVSFQLLLQAFL*

>peptide 7 (34 aa)
MPSTPFIYQKRNHTRSQQYSFCCKVWSYERTSSK*

>peptide 8 (36 aa)
MVATSLIKSCPLASDLLNIFIATSRPLRSVPLNTVP*

Sequence

>CNT30316325
GAAGAATAGCACCATACCTTCTCAAACTAAAACTGAATTCATTGGTTAAATATGAGAAAATAGACTTTAAACAAAAGAAATGATGTAATAAGGCAAGATA
TCATAAATCAAAGGAACTGATCTTATTTACTACACATAAACATCAAGCATCTTTGTGCTATCAAATATAGATGAGAACACTAAATGCCCCTATTTAATGG
GAATGTAATTGAGGAGACTCATATCACTTAATTTGCATTTAAAACTGAGTTGTTTGACTTGATTCTTCTGATTGAATTGATGAGCAAGTTTGATTTGAAT
CCTCTCCAGCATCCCTCATGGGGCTCTCTATTGATGATAAGAAAGGCTTGGAAGGCATTTGTAAGCTTTCAACTTCTTCTTCAAGCATTTCTATGACCCT
ATTCATTGAAGGGCGATTACTAGGCTTCATTTGTATACACCATAAGGCGACCATGGTCATCTTCTTAACTATTTTCTTTTCCTCTTCGGTAACATCTTCC
ATTTCTATGTCCTTTCCATCGTGCAATTGTTCATACACCCAAGTAGGGAAATAAATTTGGCTTGAATGGTCTGCAAGTGCATTTAAGTTCCTTCTTCTAC
CCGCCATTTCCATCAATAACATTCCAAAACTATAAACATCAGCTTTGTATGAAATGCCTCCAATGTTTTTGTAGAACAACTCAGGAGCCATGTATCCTAA
CGTCCCTCTTGCAGCAGTCAAAGAGACAATGCTATCATCTACTGAATATAGCTTTGCCAAGCCAAAGTCAGACACCTTCGGATCCAAATTCTCATCAAGA
AGAATGTTGTGAGGCTTGATGTCAAAGTGCAAAATCTGCATGGCACATCCTTGATGTAGATATTCAATTCCACGAGCCACTCCTAGAGCTATATCATACA
TTTTGTCATAGCTTAGGAGGGTACTTACTTCTGAGGAAAATATGTATTTATTCAAAGAGCCATTAGGCATAAACTCATATACTAGAGCTCGCTTTGATCC
TTCAACACAAAAACCAATGAGTTGAACTATATTAACATGGTGAATCCTTCCGATGGTTGCAACTTCATTGATAAAATCTTGTCCATTAGCTTCAGACTTA
CTCAACATCTTTATAGCTACGAGTCGGCCACTTCGAAGTGTTCCTTTAAATACAGTGCCATAGCCTCCTTCGCCTAATTTGTCCTTGAAATTTTTGGTCA
TCTTCTTAATTTCGTAGTAAGAGTACCTTATTGGCATGAGGTTATTGTGGCTTTGCAAGAATTCTTCAACAGCATTGTACATAGATAAATGCCTTCTACG
CCATTTATATATCAAAAACGCAATCACACACGGAGTCAACAATACAGCTTTTGCTGCAAGGTATGGTCCTATGAAAGAACATCGTCAAAATAAATTATAA
GAACAAACATGTAGATGACCTATTGTCAGCATCTTATTTATTACAGCTCAACCCACTGCCTTCCTAAATCCTAGTAATTAATCACAATTTTTTTTTTTTT
TTTTTCATGTGAATAATATTTACATCTTGCCTGCATTTCAAAATATTTCATGCTTCACAGTGGAATGAATTATCTACTAATTAAAAAGGAAAAAAATAAA
AGAAGATCGATCAGATGAGCGATATAAGGTTCTTACCGCCATAGATTGTCATGATTATCAGTAGTTTTTTGAAATAGTCTGCAAGAAATAAGAAAAATAT
AAATTACTTAATTAATCAAGAAAGTGACTCAAATAATTTGAAAATTTTAGGGTCTAATAAAATTCCATAAACAACTTTCCCGTTGGCCATGCTTAAAGAA
TAAATATAAATAACTTTATAAACTTCTAGACTTCACATGTTTGGGATTTAAGTTGGGTTGAGC