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Detailed information on CNT30316242


BLAST search results

BLAST vs Swiss-Prot:
sp|P93604|LRK10_WHEAT, E-value = 7e-119

BLAST vs NONCODE:
NONVVIT001259, E-value = 1e-88

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30580303Corylus avellanaEchinochloa crusgalli13.8931.281.51146forward

Expression of CNT30316242

Peptides detected in this lncRNA

>peptide 1 (37 aa)
MEDSLVTSLMKIFNSFSYAKRNILQLIQIKDGVLGGR*

>peptide 2 (46 aa)
MMDCTHCSYFVYKFFPISLRSVEDLHCNVNFMGKLSFEYYSICSFT*

>peptide 3 (79 aa)
SFQHFNHIFHGRTIHRVPLDAPESYSCKLLCNFSISIILNKDSYIFFLFQDIVDPFWKVDLASIFNCNVNIFPPSDYFK*

>peptide 4 (33 aa)
MHQSPTVASFFAILASPSSSTKIRISSFCSKTL*

Sequence

>CNT30316242
TCCTTCCAACATTTTAACCACATCTTTCATGGAAGGACAATCCACAGGGTGCCATTAGATGCACCAGAGTCCTACAGTTGCAAGCTTCTTTGCAATTTTA
GCATCTCCATCATCCTCAACAAAGATTCGTATATCTTCTTTTTGTTCCAAGACATTGTAGATCCATTCTGGAAAGTAGACTTGGCTAGTATTTTCAATTG
TAACGTCAACATTTTTCCTCCCTCCGACTATTTCAAATAACAGTATTCCAAAGCTATAAACATATGCTTTAGAAGACACATTCCCAAAATTTTTAGAGAA
CACTTCGGGTGCAATGTAACCCATAGTCCCCCTAGCCGTGGTCATGGACACTGCACTTTGATCCTTTGCACACAACTTGGCAAGACCAAAATCAGAAATT
TTTGGATTGAAGTTTTGGTCTAGGAAAACATTGTGAGGTTTGATATCAAAATGGAGGATTCGTTGGTCACATCCTTGATGAAGATATTCAATTCCTTTAG
CTACGCCAAGAGAAATATCTTGCAGCTTATCCAGATTAAGGATGGGGTTCTTGGCGGCCGTTGAAGATATGAACTTCTCTAGTGAATCATTTGGCAAGAA
CTCATAAACAAGAGCTCGTCTAAATCCATCAGCACAGAAGCCAACCAAACGAACTACATTCACATGATGGATTGTACCCATTGTTCTTACTTCGTTTATA
AATTCTTCCCCATTTCCCTTAGAAGTGTTGAGGATCTTCACTGCAACGTAAATTTCATGGGAAAGCTTTCCTTTGAATACTATTCCATATGCTCCTTCAC
CTAACTTTTCAGAAAATTGACTTGTAATCCTTTTAATGTCGACATAGGAGTATCTTGTGGGTTTGAAATTTCTGTAGTCTTCCAAAAACTTGTTGATCTT
TGCTTGATGTTCTTTTTCTACTTTATCATAAGTATATAACCGGTAGAGAGCAAAGATAGCTAGTAGTAATAGTAATGAACCTAAGGTGATACCTGCGTAA
TAAACATGTGTGAGTCAATAGTTTACATCTCCTCAATAAAAAAGAATTTTG