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Detailed information on CNT30316133


BLAST search results

BLAST vs Swiss-Prot:
sp|P09756|CB23_SOYBN, E-value = 6e-178

BLAST vs NONCODE:
NONBNAT007398, E-value = 2e-106

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30525395Corylus avellanaPhaseolus vulgaris73.568.686.12699forward
CNT30146374Corylus avellanaMedicago truncatula69.0969.8983.11657forward
CNT30621493Corylus avellanaCajanus cajan73.2951.9487.09697forward

Expression of CNT30316133

Peptides detected in this lncRNA

>peptide 1 (72 aa)
QRFRGEVLQVIHILCNFEEKSFTGSQYLRLTFRGRSLWRKPRHCCLLGRQGGQRGSPMAPFQSQWPEQRTQT*

>peptide 2 (29 aa)
MAHLEWMTSSSRFFAKVSGSAESPAVSQP*

>peptide 3 (31 aa)
MGQSFHLGRWGPSPHRVAHRQYGNPQQHPSR*

>peptide 4 (40 aa)
METRPTPSSGVDGATCTALPANDGEERAIVEAAIVELRLE*

Sequence

>CNT30316133
TCAGAGATTCAGAGGAGAAGTACTACAGGTAATTCACATTTTGTGCAATTTTGAGGAGAAAAGCTTCACGGGGTCTCAATATCTCCGGCTCACTTTCCGG
GGACGAAGTTTGTGGCGTAAGCCCAGGCATTGTTGTTTACTGGGTCGGCAAGGTGGTCAGCGAGGTTCTCCAATGGCCCCTTTCCAGTCACAATGGCCTG
AACAAAGAACCCAAACATAGAGAACATAGCCAATCTTCCATTCTTGAGCTCCTTCACCTTAAGCTCAGCAAAAGCTTCCGGGTCATCAGCAAGACCCAAT
GGGTCAAAGCTTCCACCTGGGTAGATGGGGTCCGTCACCTCACCGAGTGGCCCACCGGCAATACGGTAACCCTCAACAGCACCCATCAAGATGACCTGAG
TTGCCCAGATGGCCAGAATGCTTTGCGCGTGGACCAAGCTCGGGTTGCCCAAGTAGTCAAGACCGCCTTCGCTGAAGATCTGAGCTCCGGCCTTGAACCA
CACGGCCTCGCCGAACTTGACGCCGTTCCGGGACAAGAGCTCCGGGAAGACGCACCCGAGGGCTCCAAGCATGGCCCATCTGGAGTGGATGACTTCCAGC
TCACGGTTCTTTGCAAAGGTCTCTGGGTCGGCAGAAAGCCCTGCAGTGTCCCAGCCATAGTCACCGGGGAATTCTCCAGTAAGGTAGGATGGGGGCTCAC
CGGAGAATGGGCCCAAGTACTTGACACGGTCAGGGCCGTACCATGGGCTGCCGGAGGAAGCCTGCTTGAAGGCTGTTTTCCTCATGGAGACACGTCCAAC
ACCAAGCTCCGGGGTTGACGGAGCAACCTGCACCGCCTTGCCGGCAAATGATGGGGAAGAGAGAGCCATTGTTGAAGCAGCCATTGTAGAATTGAGGTTA
GAATAGAGAAAGAGACAGCAATGCAAGGGAAGGAGTGATCGATGGGTGTTT