CANTATAdb - search

Detailed information on CNT30315809

BLAST search results

BLAST vs Swiss-Prot:
sp|P09756|CB23_SOYBN, E-value = 3e-99

BLAST vs NONCODE:
NONBNAT007398, E-value = 4e-72

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30269346	Corylus avellana	Chenopodium quinoa	54.82	44.54	83.86	347	forward
CNT3055205	Corylus avellana	Amborella trichopoda	52.45	37.56	83.73	332	forward

Expression of CNT30315809

Peptides detected in this lncRNA

>peptide 1 (36 aa)
MARMLCAWTKLGLPKWPECFARGPSSGCPSSQDRLR*

>peptide 2 (29 aa)
MAHLEWMTSSSRFLAKVSGSAESPAVSQP*

>peptide 3 (40 aa)
METRPTPSSGVDGATCTALPANDGEERAIVEAAIVELRLE*

>peptide 4 (49 aa)
PTGNTVTLNSTHQDDLSCPDGQNALRVDQARVAQMARMLCAWTKLGLPK*

Sequence

>CNT30315809
CCCACCGGCAATACGGTAACCCTCAACAGCACCCATCAAGATGACCTGAGTTGCCCAGATGGCCAGAATGCTTTGCGCGTGGACCAAGCTCGGGTTGCCC
AAATGGCCAGAATGCTTTGCGCGTGGACCAAGCTCGGGTTGCCCAAGTAGTCAAGACCGCCTTCGCTGAAGATCTGAGCTCCGGCCTTGAACCACACGGC
CTCGCCGAACTTGACGCCATTCCGGGACAAGAGCTCCGGGAAGACGCACCCGAGGGCTCCGAGCATGGCCCATCTGGAGTGGATGACTTCAAGCTCACGG
TTCTTGGCAAAGGTCTCTGGGTCGGCTGAAAGCCCTGCAGTGTCCCAGCCATAGTCACCGGGGAATTCTCCAGTAAGGTAGGATGGGGGCTCACCGGAGA
ATGGGCCCAAGTACTTGACACGGTCAGGGCCGTACCATGGGCTGCCGGAGGAAGCCTGCTTGAAGGCTGTTTTCCTCATGGAGACACGTCCAACACCAAG
CTCCGGGGTTGACGGAGCAACCTGCACCGCCTTGCCGGCAAATGATGGGGAAGAGAGAGCCATTGTTGAAGCAGCCATTGTAGAATTGAGGTTAGAATAG
AGAAAGAGACAGCAATGCAAGGGAAGGAGTGAT