CANTATAdb - search

Detailed information on CNT30315764

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONSTUT001430, E-value = 8e-43

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30403407	Corylus avellana	Beta vulgaris	50	80.94	82.57	327	forward
CNT30490956	Corylus avellana	Olea europaea	44.95	70	83.33	294	forward
CNT30263629	Corylus avellana	Brassica rapa	60.4	68.94	80	395	forward
CNT30574226	Corylus avellana	Vitis vinifera	68.2	89.38	80.72	446	forward

Expression of CNT30315764

Peptides detected in this lncRNA

>peptide 1 (71 aa)
MLDYNWVRLDYTPEMWGYKLVRLGCMKEKWDCKKVMWGCKMGKWGCMPVMWGCMLAKWGCMLGKWGCNLER*

>peptide 2 (37 aa)
MEKQEKKYPHHWPRQGWNNSAENVIWKCKNDYNQQLA*

Sequence

>CNT30315764
CCTGAAGATAGATCACCATAGTAATGGAAAAACAAGAAAAAAAATATCCACACCACTGGCCAAGACAGGGATGGAACAATTCAGCTGAAAATGTAATATG
GAAATGTAAGAATGACTACAATCAGCAGCTAGCATAGTCAATCACACATTGGTACCACCAAAATGATCAGCAATTAGGACATTTTGCAACATGGTTTACC
TATAATTAGGAGATGTAGGACTATATGGACTTGACGGTGACAATCTTGGACTACTTGGTGAGTATGCCAGTGAAGGGCTGTACTTCGCCGACTGAGGATT
ATAGCTAGGAGATGTTGGACTATAACTGGGTGAGGTTGGACTATACCCCGGAGATGTGGGGCTATAAGCTGGTGAGGTTGGGCTGTATGAAGGAGAAGTG
GGACTGTAAGAAGGTGATGTGGGGCTGTAAGATGGGGAAGTGGGGCTGTATGCCGGTGATGTGGGGCTGTATGCTGGCGAAGTGGGGCTGTATGCTGGGG
AAGTGGGGCTGTAACTTGGAGAGGTAGGGCTGTAAGTTGGAGATGTTGGGCTGTAGCTGGGAGAGGTAGGGCTGTAGCTGGGAGAGGTAGGCGAGTAAGA
TGGACTTGTAGGAGAATAGGCAGGACTGGTTGGGCTATAGCCCGGAGAACTAGG