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Detailed information on CNT30315761


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CH33|UBQ11_ARATH, E-value = 2e-100

BLAST vs NONCODE:
NONGMAT000502, E-value = 3e-62

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30513636Corylus avellanaJuglans regia37.372.6789.29476forward
CNT30127456Corylus avellanaCorymbia citriodora36.2958.3189.42463forward

Expression of CNT30315761

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MVSELSTSRVMVLPVRVLTKICICENTETEI*

>peptide 2 (49 aa)
MYNVIYRLIRGSKTNITDFRKLKYRSLVICRFRYDSKSKIGKFVEIRSY*

>peptide 3 (40 aa)
MVSELSTSRVMVLPVRVFTKICIPPRRRSTRWRVDSFWIL*

Sequence

>CNT30315761
GCATATATAATAATTGTTTTTTAAAAGAGAAACTTGAACATTAACATTAAACATTTATTTTAAATCCAAAAGGGGGGGTGGGTTGAGCGCCAATCCATCA
GAAACCACCACGGAGACGGAGGACAAGGTGAAGGGTGGACTCTTTCTGAATGTTGTAGTCCGCAAGGGTACGGCCGTCCTCAAGCTGCTTACCAGCGAAG
ATTAGCCTCTGCTGGTCCGGTGGGATCCCCTCCTTGTCCTGAATCTTAGCCTTCACATTGTCGATGGTGTCCGAGCTCTCTACCTCCAGGGTGATGGTCT
TGCCGGTGAGGGTCTTCACAAAGATCTGCATCCCACCACGGAGACGGAGCACAAGGTGGAGGGTGGACTCCTTCTGGATATTATAGTCGGCTAGGGTGCG
GCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGCCTCTGCTGGTCCGGAGGAATTCCCTCCTTATCCTGGATCTTAGCCTTAACGTTGTCGATGGTGTCT
GAACTCTCGACCTCGAGAGTGATGGTCTTGCCGGTGAGGGTCTTAACGAAGATTTGCATCTGTGAGAATACAGAAACAGAGATTTGAGCTACGAAGCCTA
CGATATCGTTTCTTTATGCTATCCTTTTAAAGGAATTAAGGAAATTAGCAAAATCCTTTATAAGTATCAAAATTAGATTCGACTTTCAAGGACCAAAGAC
AATTTGGCAAATTTCTGAAAATTTCAGTATGTGATCAAACATAAAAGACTAGCAAATTCCTGAAAAGTTAAGTGTTGGATCAGATATAGATCCAACAAGC
GCGAGAAAATTGGAAAATATTAGCAAAACTCAAGTCTATGGCACAAACACAATATTAGCAACTTTCTGAATATTCAGTACAGATCTGTTGTGATCTATCT
GATCAGAATGGGTTAAAAGGAAAAAATAACAAATTTCTAACATTTCCAGCACAGATCTGCCGTGATCTGTAAACATCTTTCTGTTATTTTAGTAACATGT
ATAACGTGATCTATCGGCTAATAAGGGGCTCAAAAACGAACATAACAGACTTCCGAAAACTTAAGTACAGATCTCTTGTGATATGTCGGTTCAGATATGA
CTCAAAAAGCAAAATCGGTAAATTCGTAGAAATCAGATCTTACTAGATCTAGCACATCTTAGTTCAACATCGGTTTGATCCTTACAGATCCACAATACAT
CAACAATATTACTTCAATTTCGGTTATGAATTTTCCAGATCCGATAAATCAAAATCTACATCGAAGTAATTTTCTG