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Detailed information on CNT30315749


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CH33|UBQ11_ARATH, E-value = 5e-156

BLAST vs NONCODE:
NONMEST001181, E-value = 2e-116

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30641251Corylus avellanaNymphaea colorata40.8937.5485.99664forward
CNT30528694Corylus avellanaEucalyptus grandis42.6762.8989.75693forward
CNT30513318Corylus avellanaJuglans regia43.1768.7989.02701forward
CNT30275114Corylus avellanaChenopodium quinoa42.4398.4386.5689forward
CNT30506305Corylus avellanaNicotiana attenuata42.6773.4985.86693forward
CNT30169912Corylus avellanaPistacia vera42.1243.0285.53684forward
CNT3094992Corylus avellanaSolanum tuberosum42.2458.9386.88686forward
CNT30586586Corylus avellanaMusa acuminata42.2448.2487.03686forward
CNT30229076Corylus avellanaAnanas comosus42.3653.2987.35688forward
CNT30217432Corylus avellanaKalanchoe fedtschenkoi42.2468.8885.57686forward
CNT30128346Corylus avellanaCorymbia citriodora42.1873.7485.55685forward
CNT30364163Corylus avellanaSorghum bicolor42.374.8485.88687forward
CNT30359105Corylus avellanaLactuca sativa42.1246.585.67684forward
CNT30174651Corylus avellanaVigna angularis42.0649.6786.53683forward

Expression of CNT30315749

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MVSELSTSRVMVLPVRVLTKICICENTETEI*

>peptide 2 (40 aa)
MVSELSTSRVMVLPVRVFTKICMPPLSLSTRWRVLSFWML*

>peptide 3 (49 aa)
MYNVIYRLIRGSKTNITDFRKLKYRSLVICRFRYDSKSKIGKFVEIRSY*

>peptide 4 (53 aa)
MPSLSWILAFTLSMVSELSTSRVMVLPVRVLTKICIPPRRRSTRWRVDSFWIL*

Sequence

>CNT30315749
TGATTTTTAGGGTATTATCAACCAAAGCCAATGATAAACATGCATAACACAAATATATAGCAGAAATACAAATACATACACCAAATTTATTTAAAAGGCC
TCACAAGGCCATTAGCATATATAATAATTGTTTTTTAAAAGAGAAACTTGAACATTAACATTAAACATTTATTTTAAATCCAAAAGGGGGGGTGGGTTGA
GCGCCAATCCATCAGAAACCACCACGGAGACGGAGGACAAGGTGAAGGGTGGACTCCTTCTGAATGTTATAGTCGGCCAAGGTACGACCGTCCTCCAGCT
GCTTTCCGGCGAAGATCAACCTCTGCTGGTCTGGTGGGATCCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTATCAATGGTGTCCGAGCTCTCCACCTC
CAGGGTTATGGTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCATGCCTCCCCTCAGCCTTAGCACCAGATGGAGAGTGCTCTCCTTCTGGATGTTGTAG
TCGGCGAGGGTGCGGCCGTCCTCTAGCTGCTTCCCAGCGAAGATAAGCCTCTGCTGGTCTGGTGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTTACGT
TGTCGATGGTGTCCGAGCTCTCCACCTCCAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCATTCCACCGCGGAGGCGGAGCACAAGGTG
GAGGGTGGACTCCTTCTGGATATTATAGTCGGCTAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGCCTCTGCTGGTCCGGAGGAATTCCC
TCCTTATCCTGGATCTTAGCCTTAACGTTGTCGATGGTGTCTGAACTCTCGACCTCGAGAGTGATGGTCTTGCCGGTGAGGGTCTTAACGAAGATTTGCA
TCTGTGAGAATACAGAAACAGAGATTTGAGCTACGAAGCCTACGATATCGTTTCTTTATGCTATCCTTTTAAAGGAATTAAGGAAATTAGCAAAATCCTT
TATAAGTATCAAAATTAGATTCGACTTTCAAGGACCAAAGACAATTTGGCAAATTTCTGAAAATTTCAGTATGTGATCAAACATAAAAGACTAGCAAATT
CCTGAAAAGTTAAGTGTTGGATCAGATATAGATCCAACAAGCGCGAGAAAATTGGAAAATATTAGCAAAACTCAAGTCTATGGCACAAACACAATATTAG
CAACTTTCTGAATATTCAGTACAGATCTGTTGTGATCTATCTGATCAGAATGGGTTAAAAGGAAAAAATAACAAATTTCTAACATTTCCAGCACAGATCT
GCCGTGATCTGTAAACATCTTTCTGTTATTTTAGTAACATGTATAACGTGATCTATCGGCTAATAAGGGGCTCAAAAACGAACATAACAGACTTCCGAAA
ACTTAAGTACAGATCTCTTGTGATATGTCGGTTCAGATATGACTCAAAAAGCAAAATCGGTAAATTCGTAGAAATCAGATCTTACTAGATCTAGCACATC
TTAGTTCAACATCGGTTTGATCCTTACAGATCCACAATACATCAACAATATTACTTCAATTTCGGTTATGAATTTTCCAGATCCGATAAATCAAAATCTA
CATCGAAGTAATTTTCTGACCTAT