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Detailed information on CNT3031515


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CH33|UBQ11_ARATH, E-value = 3e-151

BLAST vs NONCODE:
NONTPRT002153, E-value = 7e-84

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30728104Theobroma cacaoCorchorus capsularis76.455.4389709forward
CNT30169881Theobroma cacaoPistacia vera73.642.585.65683forward
CNT30595409Theobroma cacaoEragrostis curvula72.6374.2383.23674forward
CNT3066368Theobroma cacaoSelaginella moellendorffii73.7176.3482.75684forward

Expression of CNT3031515

Peptides detected in this lncRNA

>peptide 1 (67 aa)
DKKRSANFYSILRLTSYKCDKTQISNIKEKEKKALPYYDSILNLKQRQNLSFRTITAHHGDEGQGGG*

>peptide 2 (45 aa)
MSLCWSGGIPSLSWILALTLSMVSELSTSRVMVLPVRVFTKICIF*

Sequence

>CNT3031515
GATAAGAAAAGATCAGCAAACTTTTATTCCATACTTAGATTAACATCTTACAAATGCGATAAGACCCAGATATCAAACATTAAAGAAAAAGAAAAAAAGG
CACTTCCTTATTATGACAGTATCTTAAATTTAAAACAACGACAAAACCTTTCCTTTAGAACAATCACTGCCCACCACGGAGACGAAGGACAAGGTGGAGG
GTAGACTCTTTCTGAATGTTATAATCAGCTAAAGTCCTCCCATCCTCCAATTGCTTCCCGGCAAAGATAAGCCTTTGCTGATCTGGGGGGATTCCTTCCT
TATCCTGAATCTTTGCCTTGACATTATCGATTGTATCCGAACTTTCCACCTCCAAGGTGATTGTTTTTCCAGTCAAGGTCTTGACAAAAATCTGCATTCC
TCCACGAAGCCTCAAAACAAGATGAAGGGTTGATTCCTTTTGTATGTTGTAATCAGCCAAGGTCCTCCCGTCCTCAAGCTGCTTCCCAGCGAAGATCAAT
CGTTGTTGGTCTGGTGGGATCCCTTCCTTATCTTGGATCTTGGCCTTAACGTTATCAATCGTGTCCGAGCTCTCGACCTCCAGGGTTATAGTCTTTCCTG
TCAAGGTTTTGACAAAGATTTGCATGCCTCCACGGAGCCTGAGGACAAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAATCCGCCAAGGTACGGCCGTC
TTCGAGCTGTTTGCCAGCGAAGATGAGCCTTTGCTGGTCGGGTGGGATCCCTTCCTTGTCTTGGATCTTGGCCTTAACGTTGTCGATGGTGTCGGAACTC
TCGACCTCGAGAGTTATGGTCTTGCCGGTCAGGGTTTTCACGAAGATCTGCATCTTCTAAAAGGCTATGAGAATAATCTGAGGAGATGATTTGAGAAAGA
TTTTGATTTGCTCTGTTTGGATGCGAGA