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Detailed information on CNT30315070


BLAST search results

BLAST vs Swiss-Prot:
sp|P93604|LRK10_WHEAT, E-value = 3e-85

BLAST vs NONCODE:
NONVVIT001259, E-value = 1e-57

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30699090Corylus avellanaQuercus lobata20.8242.7586.31168forward

Expression of CNT30315070

Peptides detected in this lncRNA

>peptide 1 (41 aa)
MDPTHYTYFIYEFFSISFGSVEDLHCNINFIGKLSFEYYSI*

>peptide 2 (29 aa)
MRWILPIIPTSFMNSSPFPLEVLRIFTAT*

>peptide 3 (37 aa)
MEDSLVASLVKIFNSFRYTKSNILQLIPIKDRVLSGR*

Sequence

>CNT30315070
CCAAAATTTCTAGAGAACACTTCAGGTGCAATGTAACCTATAGTCCCCCTAGCTGTTGCCATGGAAACTGCACTTTGATCATTTGAACACAACTTGGCAA
GACCAAAATCAGAAATTTTTGGATTGAAGTTTTGGTCTAGCAAAACATTGTGAGGTTTGATATCAAAATGGAGGATTCGTTGGTCGCATCCTTGGTGAAG
ATATTCAATTCCTTTCGCTATACCAAGAGCAATATCTTGCAGCTTATCCCAATTAAGGATAGAGTTCTTAGCGGCCGATGAAGATATGAGCTTTTCTAGT
GAATCATTTGGTAAGAACTCATAAACTAAAGCTCGTCTAAATCCATCAGCGCAAAAGCCAACTAAGCGAACCACGTTAATGCGATGGATCCTACCCATTA
TACCTACTTCATTTATGAATTCTTCTCCATTTCCTTTGGAAGTGTTGAGGATCTTCACTGCAACATAAATTTCATTGGAAAACTTTCCTTTGAATACTAT
TCCATATGATCCTTCGCCCAACTTCTTAGTAAATTGATTTGTAATCCTTTTAATATCGGCATACGAGTATCTCGTGGGTCTGAAATTTCTGTAATCCTCC
AAAAACTTTTCAATATTTGCTTGATGTTTTTTTTCTACTTTGTCGTATGTATAAAAACGGTAAAGAGCACAAAGAGCTAGTAGTAATAGAAATGAACCCA
TGATGACACCTGCATAATAAACATTCATGAATGAATAACTTCCATCTTCACAGTAAGAAGAATTTCAATTACCCAATAGACAACTCACCAGTAATCGCCG
ACTTTGA