Detailed information on CNT30315005


BLAST search results

BLAST vs Swiss-Prot:
sp|P93604|LRK10_WHEAT, E-value = 9e-115

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30501297Corylus avellanaCoffea canephora7.0530.3682.54126forward
CNT3071936Corylus avellanaQuercus suber7.8958.5192.2141forward
CNT30711018Corylus avellanaGlycine max7.3326.2583.97131forward
CNT3047926Corylus avellanaPrunus dulcis4.1426.7185.1474reverse complement
CNT3098801Corylus avellanaSolanum tuberosum7.8938.8481.56141forward
CNT30171034Corylus avellanaTrifolium pratense24.6467.5977.05440forward
CNT30143980Corylus avellanaMedicago truncatula7.7335.2982.61138forward
CNT30652116Corylus avellanaRosa chinensis7.5620.1289.63135forward
CNT30129570Corylus avellanaCorymbia citriodora17.5825.1880.89314forward
CNT30713341Corylus avellanaMalus domestica golden9.2457.8980.61165forward
CNT30573477Corylus avellanaVitis vinifera18.4221.0881.16329forward
CNT30318671Corylus avellanaAsparagus officinalis5.1524.683.792forward

Expression of CNT30315005

Peptides detected in this lncRNA

>peptide 1 (72 aa)
MVLSSDDRKGLEGICKHSTSPSSMCTTLFIEGRSLGFICIHHNATMIIFLLIFFSSSVAFSISMSFPSCNWS*

>peptide 2 (72 aa)
MPPLPFIYQECNHKWSPQYHFCCCMEHSYGRTSPKWIVSQHMLHCCKSLLLLLLLLLLLLLFCIVKAHLIAF*

>peptide 3 (36 aa)
MQSQMESPVSFLLLHGALLWKNITKMDCKPTHVALL*

>peptide 4 (36 aa)
MVATSLIKSSPLALDLLNIFIATWRPLRSVPLNTVP*

>peptide 5 (40 aa)
MYPNVPLAAVKETMFLFTGYNFASPKSETLGVKFSSRRML*

>peptide 6 (45 aa)
MATTSKRTFKYSAIASFAQFILEIFGNLSNFGIRVPYWHEVIVTL*

>peptide 7 (51 aa)
MIDLIHLIHSNSHHHLSWYSLVMIGKAWKAFVSIQLLLQACAQLCSLKGDH*

>peptide 8 (69 aa)
MHLSSFFYQPFPSITFQNYKHQLCMKLLQCFCRTTQEPCILMSLLQQSKKQCFYLLDTILLVQSQKPWE*

>peptide 9 (39 aa)
MYQWMHYLLIEACKQAIHTNSVFRIALENKTFIYKKSLKK

>peptide 10 (40 aa)
MGSNLFFHFGKFMLYILKNDMRKRKTKIKKDRRREGSYPS*

Sequence

>CNT30315005
CTCTTATTTGTTACACAGAAATTTTAATTTGCATTTAAAATTGAGATGATTGACTTGATTCATTTGATTCATTCAAATTCTCACCACCATTTGTCATGGT
ACTCTCTAGTGATGATAGGAAAGGCTTGGAAGGCATTTGTAAGCATTCAACTTCTCCTTCAAGCATGTGCACAACTTTGTTCATTGAAGGGCGATCACTA
GGCTTCATTTGTATACACCATAATGCAACAATGATCATCTTCTTGCTTATTTTCTTTTCCTCCTCTGTGGCATTTTCCATTTCAATGTCATTTCCGTCGT
GCAATTGGTCATAGACCCAAGTAGGGAAGTATATTTGGCTTGAGTGTTCTGCAAATGCATTTAAGTTCTTTCTTCTACCAGCCATTTCCATCAATAACAT
TCCAAAACTATAAACATCAGCTTTGTATGAAACTCCTCCAATGTTTTTGTAGAACAACTCAGGAGCCATGTATCCTAATGTCCCTCTTGCAGCAGTCAAA
GAAACAATGTTTTTATTTACTGGATACAATTTTGCTAGTCCAAAGTCAGAAACCTTGGGAGTAAAATTCTCATCAAGAAGAATGTTGTGAGGCTTGATAT
CAAAATGTAAAATCTGCATGTCACATCCTTGATGTAAATATTCAATCCCACGAGCCACTCCTAAAGCTATATCATACATTTGATTATAGCTTAGGAGTGT
GCATTCTTCTGACAAAAATATAAATTTATTCAGGGAACCATTAGGCATTAACTCATATACTAGAGCCCGTTTTGATCTTTTAACACAAAAACCAATGAGT
TGCACTACATTAACATGGTGAATCCTTCCAATGGTTGCAACTTCGCTTATAAAATCTTCTCCATTAGCTTTGGACTTACTTAACATCTTTATAGCCACAT
GGCGACCACTTCGAAGCGTACCTTTAAATACAGTGCCATAGCCTCCTTCGCCCAATTTATCCTTGAAATTTTTGGTAATCTTTCTAATTTCGGAATAAGA
GTACCTTATTGGCACGAGGTTATTGTGACTTTGTAGAAATTCTTCAACAACATCATACATTGATAAATGCCTCCTCTTCCATTTATATATCAAGAATGCA
ATCACAAATGGAGTCCCCAGTATCATTTTTGCTGCTGCATGGAGCACTCCTATGGAAGAACATCACCAAAATGGATTGTAAGCCAACACATGTTGCATTG
CTGTAAATCTTTATTATTATTATTATTATTATTATTATTATTATTATTATTTTGTATAGTTAAAGCTCACCTAATTGCCTTTTAAAGCCTAGTAATTAAG
TACAATACTTGTTATCTTTTATGGGTAGTAATTTATTTTTTCATTTTGGCAAATTCATGCTTTACATCCTAAAGAATGATATGCGAAAAAGGAAAACAAA
AATTAAAAAAGATCGAAGGAGAGAAGGTTCTTACCCCAGTTGATGGTCATAAACAGTAGAAACCAAATTGTAATAACTGCAAAAATTATGAAAAGAAAAT
TTAATTAATTAATGAAATTGCATAAAAAAATCTCACCTAGGGCCATGCTTAAGAAGAAATAAAAGCAACACAATAAACCCCCTTCCAGCATTTATGTGTC
CAGGCTTTCAATTAGATTGAGCTCGATTCTATATATACTTCTCAACGACCTTGAGCTAATTAAATATGTATCAGTGGATGCATTATTTACTTATCGAGGC
TTGTAAACAAGCTATCCATACTAACAGTGTATTCAGGATTGCATTGGAAAATAAAACTTTTATCTATAAAAAAAGTTTAAAAAAAA