Detailed information on CNT30314958


BLAST search results

BLAST vs Swiss-Prot:
sp|P93604|LRK10_WHEAT, E-value = 8e-103

BLAST vs NONCODE:
NONVVIT001285, E-value = 2e-20

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30171019Corylus avellanaTrifolium pratense8.0838.8282.58132forward
CNT30109318Corylus avellanaOryza longistaminata3.9825.189.2365forward
CNT3024212Corylus avellanaPopulus trichocarpa29.576.0379.88482forward

Expression of CNT30314958

Peptides detected in this lncRNA

>peptide 1 (69 aa)
MHLSSFFYRPFSSTTFQNYKHQLCMKRLQCFCRTTQEPCTPMSLLQQSEKQCCHLLDTILLVQSQKPWE*

>peptide 2 (40 aa)
MYPNVSLAAVRETMLSFAGYHFASPKSETLGVKLSSRRML*

>peptide 3 (36 aa)
MVATSLIKSCPLALDLPNIFMATRRPLRSVPLNTVS*

>peptide 4 (35 aa)
MQSQMESPVSFLLHGALLWKNITKMDCKPTHVALL*

>peptide 5 (33 aa)
MYLFKEPLGMNSYTRARFDPSTQKPMSCTTLIW*

>peptide 6 (63 aa)
MPPLPFIYQECNHKWSPQYHFCCMEHSYGRTSPKWIVSQHMLHCCKSLLLLLFCIVKAHLIAF*

>peptide 7 (51 aa)
MIDLIHLIRLNSHNHLFWYFLMMIGKAWKAFVGIQLLLQAFVRLCSLKGDH*

Sequence

>CNT30314958
ACTATCAAATATATATGAGAAAACTAATTTCCTCCTTCATCAAGGATATAATAAATGAAAAGACTCGCATATAAATTAATTTGCATTTAAAGTTGAGATG
ATTGACTTGATTCATTTGATTCGTTTGAATTCTCACAACCATCTTTTTTGGTACTTTCTAATGATGATAGGAAAGGCTTGGAAGGCATTTGTAGGCATTC
AACTTCTCCTTCAAGCATTTGTACGACTTTGTTCATTGAAGGGCGATCACTAGGCTTCATCTGAATAGACCATAATGCAATAATGATCATCTTCTTGCCT
ATTTTCTTTTCTTCCTCTGTGGCATCTTCAATTTCTACGTCATTTCCGTCGTGCACCTGGTCATAGACCCAAGTAGGGAAGTATATTTGGTTTGAGTGTT
CTGCAAATGCATTTAAGTTCTTTCTTCTACCGGCCATTTTCATCAACAACATTCCAAAATTATAAACATCAGCTTTGTATGAAACGCCTCCAATGTTTTT
GTAGAACAACTCAGGAGCCATGTACCCCAATGTCTCTCTTGCAGCAGTCAGAGAAACAATGCTGTCATTTGCTGGATACCATTTTGCTAGTCCAAAGTCA
GAAACCTTGGGAGTAAAATTATCATCAAGAAGAATGTTGTGAGGCTTGATATCAAAGTGTAAAATCTGCATGTCACATCCTTGATGTAAATATTCAATCC
CACGAGCCACTCCTAGAGCTATATCATACATTTGATTATAGCTTAGGAGCGTGCATACTTTTGGAGAAAATATGTATTTATTCAAGGAACCATTAGGCAT
GAACTCATATACAAGAGCCCGTTTTGATCCTTCAACGCAAAAACCAATGAGTTGCACTACATTAATATGGTGAATCCTTCCAATGGTTGCAACTTCACTT
ATAAAATCTTGCCCATTAGCTTTGGACTTGCCTAACATCTTTATGGCCACAAGACGGCCACTTCGAAGCGTTCCTTTAAATACAGTGTCATAACCTCCTT
CACCCAATTTGTCCTTGAAACCTCGGTAATCTTCTTAATTTCGGAATAAGAGTACCTTATTGGCATGAGGTTATTGTGACTTTGTAGAAATTCTTCAACA
ACATCATACATTGATAAATGCCTCCTCTTCCATTTATATATCAAGAATGCAATCACAAATGGAGTCCCCAGTATCATTTTTGCTGCATGGAGCACTCCTA
TGGAAGAACATCACCAAAATGGATTGTAAGCCAACACATGTTGCATTGCTGTAAATCTTTATTATTATTATTATTTTGTATAGTTAAAGCTCACCTAATT
GCCTTTTAAAGCCTAGTAATTAAGTACAATACTTGTTATCTTTTATGGGTAGTAATTTATTTTTTCATTTTGGCAAATTCATGCTTTACATCCTAAAGAA
TGATATGCGAAAAAGGAAAACAAAAATTTAAAAAGATCGAAGGAGAGAAGGTTCTTACCCCAGTTGATGGTCATATACAGTAGAAACAGGATTGTCAGAA
CTGCAAAAATTATGAAAAGAAAATTTAACTAATTAATGAAATTGCATAAAAAAATCTCACCTAGGGCCATGCTTAAGAAGAAATAAAAGCAACACGATAA
ACCCCTTCCAGCATTGAAAAAAAATAAAAAAAAA