Detailed information on CNT30314841


BLAST search results

BLAST vs Swiss-Prot:
sp|P93604|LRK10_WHEAT, E-value = 2e-126

BLAST vs NONCODE:
NONVVIT001259, E-value = 1e-86

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30152410Corylus avellanaPrunus persica12.5634.7585.71147forward
CNT3026124Corylus avellanaPopulus trichocarpa50.685.1879.22592forward

Expression of CNT30314841

Peptides detected in this lncRNA

>peptide 1 (56 aa)
MVITYAKFTYNYSNSEMTSNSWCRRFVAIFALIFTGPAEAKGLGGMVKLSPSPSNI*

>peptide 2 (46 aa)
MMYHTQCFYFINEFFPIFIGNVEDLHCNMNFIGKLSFEYCSICSFA*

>peptide 3 (43 aa)
MEGRSAGCHWMHQSPTIASFFAILASPSSSTKIRMSSFSSKRL*

>peptide 4 (34 aa)
MPRAISCSLSQLRIHSLVSVEDMNFSSESFGKNS*

>peptide 5 (30 aa)
MDTALCSFEHNLASPKSDIFGLKFWSSKTL*

Sequence

>CNT30314841
CAGGTACGTACATTTTTATAATCTCCAAATTACTCTTACATTGATACAAGAAAAAACTTGAAGTCGCTGCATTGACTCCAAGTCTACAAGATTAATAACT
TCTAATTAAGAGGTACAAGATTATTGCAACCCAGATGGTTATCACATATGCCAAGTTTACATACAATTATTCTAATTCCGAGATGACCTCCAACTCATGG
TGTAGACGTTTTGTAGCTATATTTGCATTAATTTTTACTGGGCCTGCAGAAGCAAAGGGATTGGGAGGCATGGTTAAGTTATCTCCTTCTCCTTCCAACA
TTTGAACTACATCTTTCATGGAAGGACGATCTGCTGGGTGCCATTGGATGCACCAGAGTCCTACAATTGCTAGCTTCTTTGCAATTTTAGCATCTCCATC
ATCCTCAACAAAGATTCGTATGTCTTCTTTTTCTTCTAAGAGATTATAGATCCATTCTGGAAAGTAGACTTGGCTGGAGTTATCAACTATAACATCAACA
TTTTTCCTCCCTCCAACTATTTCAAGTAACAATATTCCAAAACTATAAACATCTGCTTTAGAAGACACATTTCCAAAATTTCTAGAGAATACTTCGGGTG
CAATGTAACCCACAGTCCCCCTGGCTGTGGTCATGGACACTGCACTTTGCTCCTTTGAACACAACTTGGCGAGTCCAAAATCAGATATTTTTGGATTGAA
GTTCTGGTCTAGCAAAACATTGTGAGGTTTGATATCGAAATGGAGGATTCGTTGGCCGCATCCTTGGTGAAGATACTCAATTCCTTTTGCTATGCCAAGA
GCAATATCATGTAGCTTATCCCAATTAAGGATACATTCCTTGGTGTCCGTTGAAGATATGAACTTCTCTAGTGAATCATTTGGTAAGAACTCATAAACTA
AAGCTCGTCTAAATCCATCAGCACACAAGCCAACCAAGCGAACCACGTTAACATGATGTATCATACCCAATGTTTCTACTTCATTAATGAATTCTTCCCC
ATTTTCATTGGAAATGTTGAGGATCTTCACTGCAACATGAATTTCATTGGAAAGCTTTCCTTTGAATACTGTTCCATATGCTCCTTCGCCTAGCTTCTCA
GTAAACTGATTTGTAATCCTTTTAATATCAACATACGAGTATCTTGTGGGTTTGAAATTTCTGTAATCTT