Detailed information on CNT30314232


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30234658Camelina sativaBrassica oleracea42.4237.9390.26154forward
CNT30597864Camelina sativaFraxinus excelsior31.968.383.62116reverse complement
CNT30570089Camelina sativaVitis vinifera36.647.0986.47133forward
CNT3037338Camelina sativaCucumis melo30.327.3683.64110forward
CNT30333798Camelina sativaCynara cardunculus32.7823.9484.03119forward
CNT3049161Camelina sativaCucumis sativus30.0331.1481.65109forward

Expression of CNT30314232

Peptides detected in this lncRNA

>peptide 1 (65 aa)
GRYKNTKQMPISFLLPNQTNNILHSSNHQPRKERWQIYFPNKVPRIHEISTKYRFLMLHTAQISK*

>peptide 2 (55 aa)
DDTRIQNKCRSLFYYRTKQITSYTQATTNRGKRGGRSTSQTKFQESMKYPRNIGS*

Sequence

>CNT30314232
GGACGATACAAGAATACAAAACAAATGCCGATCTCTTTTTTATTACCGAACCAAACAAATAACATCCTACACTCAAGCAACCACCAACCGAGGAAAGAGA
GGTGGCAGATCTACTTCCCAAACAAAGTTCCAAGAATCCATGAAATATCCACGAAATATCGGTTCCTGATGCTACATACCGCACAAATAAGCAAGTAGCT
GGAAATTTTTGACATTTGTTTTGGTTCCTCATTCTGCTCTGGACTGACCAGCTCGAGAAGATAAGATAATGCCTACAATGAGGCCGTAAAGAGCAAGTGC
TTCCGCAAAGATGAGGATAAGAATCATCCCAACAAAGAGCTTAGGCTGCTGAGCATTTGCCCT